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scnpilot_solids1_trim150_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_15_1
unknown

Not on your lists

comp(290..481)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(608..790)
DNA (183bp) protein (61aa)
UPI0003CEE84F related cluster n=1 Tax=unknown RepID=UPI0003CEE84F
Uncharacterized protein {ECO:0000313|EMBL:ESY70098.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
Protein of unknown function (DUF3606)
scnpilot_solids1_trim150_scaffold_15_3
unknown

Not on your lists

comp(1096..1572)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_4
unknown

Not on your lists

comp(1569..1901)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_5
unknown

Not on your lists

comp(1938..2222)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_6
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2334..2576
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H0Y2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ06482.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
XRE family transcriptional regulator
scnpilot_solids1_trim150_scaffold_15_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2868..3932)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRQ5_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24123.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
scnpilot_solids1_trim150_scaffold_15_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4356..5006)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11H54_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63271.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids1_trim150_scaffold_15_9
unknown

Not on your lists

comp(5998..6264)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_10
unknown

Not on your lists

comp(6261..6473)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6470..6901)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84244.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_15_12
unknown

Not on your lists

comp(6891..7151)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_13
unknown

Not on your lists

comp(7154..7522)
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_14
unknown

Not on your lists

7552..7875
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_15
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7855..10101)
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002559005
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ33922.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_15_16
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10098..11744)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D4F16
Uncharacterized protein {ECO:0000313|EMBL:ESZ50446.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
scnpilot_solids1_trim150_scaffold_15_17
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11791..11991)
DNA (201bp) protein (67aa)
UPI0003D06E9B related cluster n=1 Tax=unknown RepID=UPI0003D06E9B
Uncharacterized protein {ECO:0000313|EMBL:ESZ50972.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
scnpilot_solids1_trim150_scaffold_15_18
unknown

Not on your lists

comp(11988..12143)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_19
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12542..13069
DNA (528bp) protein (176aa)
UPI0003CFD95B related cluster n=1 Tax=unknown RepID=UPI0003CFD95B
Uncharacterized protein {ECO:0000313|EMBL:ESZ69534.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_15_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..13623)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002F1BBE0
Uncharacterized protein {ECO:0000313|EMBL:AJC81754.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_15_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13623..14786)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00035E619D rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC81755.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
DNA-binding protein rbh
scnpilot_solids1_trim150_scaffold_15_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15099..15776)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0V886_RHILV
Uncharacterized protein {ECO:0000313|EMBL:EJC69371.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_15_23
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15769..16326)
DNA (558bp) protein (186aa)
UPI0003D048CC related cluster n=1 Tax=unknown RepID=UPI0003D048CC
Fis family transcriptional regulator {ECO:0000313|EMBL:ESZ56517.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
AP2 domain.
scnpilot_solids1_trim150_scaffold_15_24
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16545..16721)
DNA (177bp) protein (59aa)
UPI0003D00DD3 related cluster n=1 Tax=unknown RepID=UPI0003D00DD3
Regulatory protein {ECO:0000313|EMBL:ESZ56518.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
scnpilot_solids1_trim150_scaffold_15_25
unknown

Not on your lists

comp(16806..17867)
DNA (1062bp) protein (354aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_15_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17959..19227)
DNA (1269bp) protein (423aa)
Phage integrase family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP2_9RHIZ rbh
Phage integrase family protein {ECO:0000313|EMBL:EHK57335.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phage integrase family protein
scnpilot_solids1_trim150_scaffold_15_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19363..19911
DNA (549bp) protein (183aa)
Glycosyl transferase family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDB1_9RHIZ
Glycosyl transferase family protein {ECO:0000313|EMBL:EKF20146.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glycosyl transferase family protein
scnpilot_solids1_trim150_scaffold_15_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19874..20782)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3M8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13657.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
polyphosphate kinase 2, PA0141 family
scnpilot_solids1_trim150_scaffold_15_29
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20869..22038
DNA (1170bp) protein (390aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
ATPase domain-containing protein; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
UPI0003CDDE47 related cluster n=1 Tax=unknown RepID=UPI0003CDDE47
scnpilot_solids1_trim150_scaffold_15_30
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22113..22823
DNA (711bp) protein (237aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWY5_OCHA4 rbh
phosphate uptake regulator PhoU; K02039 phosphate transport system protein rbh
PhoU family transcriptional regulator {ECO:0000313|EMBL:EXL07687.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
Displaying items 1-30 of 260 in total

View Taxonomy