ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_97_243

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(233348..236239)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367EDB7 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 958.0
  • Bit_score: 1436
  • Evalue 0.0
  • rbh
Cation:proton antiporter {ECO:0000313|EMBL:ETR77583.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 959.0
  • Bit_score: 1322
  • Evalue 0.0
phaA1; monovalent cation/H+ antiporter subunit A similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 953.0
  • Bit_score: 1265
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2892
ATGGAGCCTTCGGCGCTGGTACTGATCGTTGCCTTGCCGTTTGTCGCAGGCTTGGCGACCCTCGTCCTCCGATCCGATTCGCGTACCCTGGCGACCGGGATCGCCGGCCTGACGACGCTTGCATGTCTGGTGCTAACCGTCATGCTCTATCCATCGGTAGGCAGCGGGCAAAGCGTCCGCCGCGAGATCGAGTGGATACCTTCCCTCGGCCTCGACTTCGCGCTCAGGATGGACGGCTTCGCCTGGTTCTTCACCTTCCTCGTCAGCGCCATCGCGCTGCTCGTCGTCATCTATACGCGCTATTACATCTCGCCGGAGGACCCGGTCCGTCGGTTCTATTTCCTGTTCCTGGCGTTCATGGGCTCGATGCTCGGCATCGTCCTTTCAGGCAACCTCATCCTGCTCGTCGTCTTCTGGGAACTGACCAGCATTTTCTCCTTCCTGCTGGTCGGCTACTGGCATCATAATCCGGCGGCGCGCGACGGCGCCCGCATGGCGCTGACCGTGACGGCGGTCGGCGGGCTGGCGCTGCTCGCCGGCGTGCTGGTGATCGGTCACATCGTCGGCAGCTACGACCTCGATGTCGTGCTCGGTTCGGGCGATGCCATCCGCACGAGCCCGCTCTATGTCCCGGCGCTGCTCCTCATCCTGCTCGGCGCGTTCACCAAGAGCGCGCAGTTCCCGTTCCATTTCTGGCTGCCCAACGCCATGGCCGCCCCGACGCCGGTTTCCGCCTTCCTGCATTCGGCGACGATGGTGAAGGCCGGGGTCTTCCTGATGGCGCGGCTGTGGCCGGTGCTTTCCGGCACGCCCGAATGGTTCATCATCGTCGGGCTGGTGGGCATGGCGTCGTTCGTGCTCGGCGCCTATCTCGCCATGTTCCAGCAGGATCTGAAGGGCCTGCTCGCCTATTCGACGATCAGCCATCTCGGACTGACGACGCTGCTGCTCAGCCTCGGCAGCCCGCTCGGGCTGGTGGCCGCCATTTTCCACATGCTCAACCATGCCACCTTCAAGGCGTCGCTTTTCATGGCCGCCGGCATCATCGACCACGAGGCCGGCACCCGGGACCTCCGGCGCCTGAGCGGCCTGTTCCGCTATATGCCGATAACCGGCACGCTGGCCATGGTTGCGAGCGCGGCCATGGCGGGCGTGCCGCTCCTGAACGGCTTCCTGTCGAAGGAGATGTTCTTCGCCGAAGCGGTGGCGACCCATGCCGATTCGTGGGTGGACGTGGCCGCGCCCTACGCTGCCGTGCTCGGAAGCGCGTTCGCCGTGACCTACTCGATGCGTCTCATCCATTCCATCTTCATGGGCGCGCCGCCCGAAAGCTTTCCGCACGAGCCGCACGAGCCGCCTTTCTGGATGCGCTTTCCCGTAACCTTCCTGGTCATCGCATGCCTTGTCGTCGGCATCGTGCCCGGCCTGACCGTCGGGCCGTTCCTGAAAATCGCCGCCTCGTCAGCGCTTGGCGCCCCCGCGCCCGAATACAGTCTCGCTGTATGGCATGGCTTCACGATCCCGCTTGCGATGAGCCTTGTGGCGCTCGGCGGCGGGGCGCTGCTCTATCTTTTGATCGGCAATTATCTCGAGCGGGCGGAAAGACCGTTCATATTCGGCCGGATCGAGGGCAACCGCATCTTCGAGCGTGTAATGGTCGCGATCTCATGGCAGGGCGCGCGTTTCGTCGAGACGGTGTTCGGCACGAGGCGCATGCAGCCGCAAATGCTGGCGCTGGTCATCGTGGCGATTCTGGCGGCGCTCCTGCCGCTTTCCGGTGGCCTCGGCTTTGGCGATTTCCGGGGAGCGGCGGTCGATCCGGTCTTCGTCGTGCTCTGGACGGTCGGCATGGTATGCGCGGTCGCAGCGGCCTATCAGGCGAAATATCATCGCCTCGCCGCGCTTGTCCTGATGGGCGGAACGGGGCTCGTCACCTGCGTCACCTTCGTGTGGCTTTCGGCGCCCGATCTTGCGGCGACCCAACTCGTCGTCGAGATCGTCACCACCGTTCTCATCATGCTTGGATTGCGCTGGCTGCCCAAGCGTTCGGAGACCCTGGTCGAGCCGGGCGGACTTTTGGCGCGCCTCCGCCGTATCCGCGACCTCGCCGTCGCTATAGCCGCAGGCGCAGGCATGGCCGCGGTCGCCTACGCGGTGATGACCCGCACGCCGCCGGATACGATCGCCAATTTCTTCGTGGAGAAATCCTATGACGAAGGAGGCGGGCGCAACATCGTCAACGTGATCCTCGTGGATTTCCGCGGCTTCGATACGCTGGGCGAGATCACGGTGCTTGGCATCGTCGCGCTGACCGTGTTCGCACTCCTCAGGCGCTTCCGCCCGGCACCCGACAGCATCGAGCGACCCGAGCAGCAGCGCATCCAGTATGCCTATGACGAAGAGGACCCCGATCGCGAGCCCGGCACCACCGCGTCCGACTATCTGTTTGTGCCGTCGATCATCATGCAGTGGATGTTCGCGGTCGTCATCGTCCTTGCGGCCTATCTCCTCTTGCGCGGCCATGATGCGCCGGGCGGCGGCTTCGCGGCGGGCGTGGCGTTGGCAGCCGGCTTCATCCTTCAATACATGGCGGCGGGAACCAATTGGGTCGAAAGCAGGCTGCGCGTCCTGCCGGTCAGATGGATCGGCGGCGGCCTGTTGCTCGCCGCGCTCACCGGCGCGACAGCCATCCTGTTCAATCGCCCGTTCCTCACTTCCTATTTCCGCTATGCCGACTTGCCCCTGATCGGGAAGGTCCCGCTGGCGAGCGCTGCCCTTTTCGATCTCGGCGTTTTCGCGCTGGTCGTGGGGGCGACCGTCCTCATGCTGATCGCGATCGCCCACCAGTCCATCCGCCGGTTGCGCGCCGCCCGTGTCGAGGAGCAGCCCTGA
PROTEIN sequence
Length: 964
MEPSALVLIVALPFVAGLATLVLRSDSRTLATGIAGLTTLACLVLTVMLYPSVGSGQSVRREIEWIPSLGLDFALRMDGFAWFFTFLVSAIALLVVIYTRYYISPEDPVRRFYFLFLAFMGSMLGIVLSGNLILLVVFWELTSIFSFLLVGYWHHNPAARDGARMALTVTAVGGLALLAGVLVIGHIVGSYDLDVVLGSGDAIRTSPLYVPALLLILLGAFTKSAQFPFHFWLPNAMAAPTPVSAFLHSATMVKAGVFLMARLWPVLSGTPEWFIIVGLVGMASFVLGAYLAMFQQDLKGLLAYSTISHLGLTTLLLSLGSPLGLVAAIFHMLNHATFKASLFMAAGIIDHEAGTRDLRRLSGLFRYMPITGTLAMVASAAMAGVPLLNGFLSKEMFFAEAVATHADSWVDVAAPYAAVLGSAFAVTYSMRLIHSIFMGAPPESFPHEPHEPPFWMRFPVTFLVIACLVVGIVPGLTVGPFLKIAASSALGAPAPEYSLAVWHGFTIPLAMSLVALGGGALLYLLIGNYLERAERPFIFGRIEGNRIFERVMVAISWQGARFVETVFGTRRMQPQMLALVIVAILAALLPLSGGLGFGDFRGAAVDPVFVVLWTVGMVCAVAAAYQAKYHRLAALVLMGGTGLVTCVTFVWLSAPDLAATQLVVEIVTTVLIMLGLRWLPKRSETLVEPGGLLARLRRIRDLAVAIAAGAGMAAVAYAVMTRTPPDTIANFFVEKSYDEGGGRNIVNVILVDFRGFDTLGEITVLGIVALTVFALLRRFRPAPDSIERPEQQRIQYAYDEEDPDREPGTTASDYLFVPSIIMQWMFAVVIVLAAYLLLRGHDAPGGGFAAGVALAAGFILQYMAAGTNWVESRLRVLPVRWIGGGLLLAALTGATAILFNRPFLTSYFRYADLPLIGKVPLASAALFDLGVFALVVGATVLMLIAIAHQSIRRLRAARVEEQP*