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scnpilot_solids1_trim150_scaffold_30_17

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(27066..27395)

Top 3 Functional Annotations

Value Algorithm Source
Anti-anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFR6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 162
  • Evalue 2.80e-37
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 162
  • Evalue 3.90e-37
anti-anti-sigma factor family protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 107.0
  • Bit_score: 88
  • Evalue 1.20e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGACATCACTGAAAGCCGCCGCGGTGGGGTTCTGGTCGTCACCCCGATCGGCCGGATTGACAGCAACACGTCGTCGGGCTTTGGCAGGCATATGAATGCTGTCATCGATCGCGGAGACGTCAATATCGTCGTTGACATGGCCGCGCTTGACTACATCAGCAGCACTGGTCTTTCGGTCTTCCTGTCTTCGGCCAAGAAAATAAAGATCGCAGGCGGGAGCATGGTGTTGAGCGGCCTCAACAGCCGTATCCGGCTGGCATTCGAAATGAGCGGATTCCTGCGGCTTTTCCCGGTTTACCCCAGCGTCGAGGCCGCGCTCGCCGGTTGA
PROTEIN sequence
Length: 110
MDITESRRGGVLVVTPIGRIDSNTSSGFGRHMNAVIDRGDVNIVVDMAALDYISSTGLSVFLSSAKKIKIAGGSMVLSGLNSRIRLAFEMSGFLRLFPVYPSVEAALAG*