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scnpilot_solids1_trim150_scaffold_30_23

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 32674..33357

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 233.0
  • Bit_score: 124
  • Evalue 1.00e-25
FHA domain-containing protein {ECO:0000313|EMBL:EYR83989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 233.0
  • Bit_score: 124
  • Evalue 1.40e-25
FHA domain-containing protein; K11894 type VI secretion system protein ImpI similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 186.0
  • Bit_score: 97
  • Evalue 7.10e-18

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGAAGTTGACGCTTTCCTTGCGCACGTCGCCGCCTCCCGAAGGTGTGGAGGCGCAGCATGTGCTTGAGCAAGGCAGCATGACGATCGGGCGCGCGTCCGAGGCCACCTGGACGATCCCGAATCCGACGCGGATCATCTCAAAGCAGCATTGCCGCATCGACGCGGCGCCCGGCGGCTTTACGATAACCGATATCTCGACCAACGGCGTCTTTGTGAACGAGCAGCCGATCGGGAGCCAGTCCACCCGACGTCTCGCGCATGGCGACCTGATCCGGCTGGGTGACATCGTCATCGCGGTCGGAATCGAAGGCGCGGACCAGGTCGCGCCGGACAGCGCCCCGGTGATGGACGGGCCATTCGGCGAAAATGAGCCCCGTCCCGTGCCCGGGCCGGCCATCGTCGAGCCGCTGCCGGCAGCCGGCGTTTCGATCGCCGAGGACTGGTGGAAGGAAGCTCCCGTCGCCCGGACCGACAGTGTCGCGGCACCTTTTGTTGCCGGCGCGCAGTCACCTGTCGCCGACGCTATCGTCGTCAGCCTGATCGAGTCTTTTCCAGAGCTTGACGTCACAGCGCTGGCGCAAGGGGTCGACGTGGCGGGCGCTGTCGTCAGCGATCGGGAATGGCAGGCTTTCCACGATCGGCTGCGATCATATTTGCGGGAACGGTATCCGGAGAACGCGTAA
PROTEIN sequence
Length: 228
VKLTLSLRTSPPPEGVEAQHVLEQGSMTIGRASEATWTIPNPTRIISKQHCRIDAAPGGFTITDISTNGVFVNEQPIGSQSTRRLAHGDLIRLGDIVIAVGIEGADQVAPDSAPVMDGPFGENEPRPVPGPAIVEPLPAAGVSIAEDWWKEAPVARTDSVAAPFVAGAQSPVADAIVVSLIESFPELDVTALAQGVDVAGAVVSDREWQAFHDRLRSYLRERYPENA*