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scnpilot_solids1_trim150_scaffold_30_26

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 35314..36783

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEL4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 496.0
  • Bit_score: 525
  • Evalue 4.30e-146
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EYR83992.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 496.0
  • Bit_score: 525
  • Evalue 6.00e-146
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 484.0
  • Bit_score: 275
  • Evalue 2.40e-71

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAACGATCCGATCTTCGATCCGCCGGACGCCGACGATACGATCCGGCAACCTTTGCCCCAGATCAGGCAAGGCTCGCGGCCGAGCGGCGGGAGCCTGTTCCTCGATGATGGTTTCGATGCCGCAGGCGAGGACGAGTTCAAGGCGAACTTCTCCCAGCCGCGCGCGCGGCGATCAGATGATTTCGACGACCTGTTGGGAAGCGACGGCGCGTTCGCGGACGATTTCGGCTCGGGCGACTATCTGAAATCCGGCAAGGAGGGGGCGATCGAGAAGGCGTTCGATCTTGCCTCCGTCAATCCGCTGGTCAGCGCCGCGGCACCTCTTCTGTGGCTGGCGGGCAGACTGAACGAGAGCGCCCCGCCGGAGGACGTGGAACGCTTCCGCCAGCGCATCCTGGCTGAAATCAAGCAGTTCGAGACCGCCGCGATGGCGCGCGACGTCCCGCCCCGGCTGGTGCGCATGAGCCGCTACGCGATCGCCGCGACGCTCGACGATATCATCCTCAACACGGAATGGGGCGGTCAGGCCGTCTGGGCCGGGCGCAGTCTCGTCAGTTCGCTCTATAACGAGACATGGGGCGGCGAGCGCTTCTACGAGCTGCTCAACCAGATGCGCCGGCAGCCCGACGAGAACATCGACGGCCTGGAACTCATGGCGATCTGCCTGGCGGTCGGATTTTCGGGCAAGTACCGGGTCATGGAGGGCGGCCAGGGGCGGCTCAGCCGGCTCCGCCACGAGCTCTACCGGATCATCCGCCGCGTGCGCGGCCCCTACGACCGCGAATTGTCGCCGCCATGGGAGCCGGTCGCCGCACCGCATGTCGCGCCGAAATCGGCGCGCGGCGCCTGGATCATCGCCATCGTGGCGCTGCTTCTCGCCGCCATCCTCTGGGCTCTGTCGAGCTATGATTTGCGCCAGCGGGTCGACCAGGCCGTGCAGCAGATCGACGCGCTGGCGCCGGCGATCCCGGTCGTCGTCGCCGGACCGGCGATCCCGAACATCCCCGAGCCGGTGAAGCCGAAGACGCAGATGGAGCGGCTGCAGGGCTTCCTCGCCGAAGACATCGCCGCCAGGCATGTGGAACTCGTCAGGCAGGGCGACAAGATCGTCATCCGGATGCTGAACGCCTCCTTCCCGTCGGGAGGCGTCGATTTGGCTTCGTCCAGCGACCCGCTCGTCGGCCGCATCGCCGCCGCGCTCGATCACGAGAAGGGACCGATCGTCGTTTCCGGCAACACCGACAACGTCGCCGTGCCGTACGGCAGCAAGCTCGGCGACAATATGGCGATCTCCAAGGCCCGCGCCGATTCGGCGGCCGGCATCCTGCGCAAGGGCCTCGACGATCCATCGCGCGTGACCACGGTCGGCCGCGGATCGAACGATCCGATCGGCTCCAACTCGACCGCGGAGGGCCGCGAGCGGAACCGGCGCGTCGAGTTCCTGATCGACGCGGAGGCGGCAAACTGA
PROTEIN sequence
Length: 490
MNDPIFDPPDADDTIRQPLPQIRQGSRPSGGSLFLDDGFDAAGEDEFKANFSQPRARRSDDFDDLLGSDGAFADDFGSGDYLKSGKEGAIEKAFDLASVNPLVSAAAPLLWLAGRLNESAPPEDVERFRQRILAEIKQFETAAMARDVPPRLVRMSRYAIAATLDDIILNTEWGGQAVWAGRSLVSSLYNETWGGERFYELLNQMRRQPDENIDGLELMAICLAVGFSGKYRVMEGGQGRLSRLRHELYRIIRRVRGPYDRELSPPWEPVAAPHVAPKSARGAWIIAIVALLLAAILWALSSYDLRQRVDQAVQQIDALAPAIPVVVAGPAIPNIPEPVKPKTQMERLQGFLAEDIAARHVELVRQGDKIVIRMLNASFPSGGVDLASSSDPLVGRIAAALDHEKGPIVVSGNTDNVAVPYGSKLGDNMAISKARADSAAGILRKGLDDPSRVTTVGRGSNDPIGSNSTAEGRERNRRVEFLIDAEAAN*