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scnpilot_solids1_trim150_scaffold_261_13

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 13038..13892

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane permease MsmF n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RAM0_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 276.0
  • Bit_score: 321
  • Evalue 1.20e-84
  • rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AKI00747.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 284.0
  • Bit_score: 383
  • Evalue 2.80e-103
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 269.0
  • Bit_score: 250
  • Evalue 8.20e-64

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGTCACGGACAACCCGCCTCCTCGTTGCCTTCTGTTTTTTGCTGCCGGCGGTCCTGTGCGTGTTCCTCCTGCGCCTGTGGCCCGCCGGACTGGCATTGCGAAATTCGTTGATTGCGCCCGGAGACGGCGGCTATTCCCTGGAGAATTACAGGTACATCTTCACCGATCCGGACTTCCTGAACAGCCTCAAGGTAACGCTTGTCTATTCGGTGATCGTAAACCCGCTCCAGATCGGGATCGCCTTGGCATTGGCCCTCCTGGTGAATGCAAAGGGACCGCTCATCGGGTTCTCGCGCACGCTTATCCTGCTTCCGGTTGCTATCCCCCAAAGCGTCTCCGCGGTGGTCTGGGGCGTCGCACTGCGCCCCGACGGCCAGATAAACGCCATACTGGTAGCGCTGGGCATCGAGCCGCAACGCTTTCTGACATCGCCCAACCAGGCGCTGATGTCGATCATGCTTATCGTGAGTTGGATCGGCGTCGGCTACTGGATGACTTTCATCCTTGCCGGCCTGCAGGACATTCCAAAGGCCCTGTACGAAGCCGTCGTCATCGACGGCGCAAACCGCTGGCAGCAATTCTGGTACGTCACGCTGCCTCAATTGCGGCGGCCGCTGACCTTCGTGCTGGTGGCCGATACGGTTGCGAATTTCCTTGTCTTCGCGCCCGTTCAGATCCTGACGGCGGGGGGGCCTGAAGGCTCGACGAACCTGATCATGAACGACATCTACACCAAGGCATTCGTGATCAGCGATCCCGAAAGCGCGGCTGCAACAACCATCGTCCTGGTATCGGCGGTGCTGATTGTCGTGACCCTGCAATTTCACTTGATGAGCCGCGGAGAGGATCGGTGA
PROTEIN sequence
Length: 285
MSRTTRLLVAFCFLLPAVLCVFLLRLWPAGLALRNSLIAPGDGGYSLENYRYIFTDPDFLNSLKVTLVYSVIVNPLQIGIALALALLVNAKGPLIGFSRTLILLPVAIPQSVSAVVWGVALRPDGQINAILVALGIEPQRFLTSPNQALMSIMLIVSWIGVGYWMTFILAGLQDIPKALYEAVVIDGANRWQQFWYVTLPQLRRPLTFVLVADTVANFLVFAPVQILTAGGPEGSTNLIMNDIYTKAFVISDPESAAATTIVLVSAVLIVVTLQFHLMSRGEDR*