ggKbase home page

scnpilot_solids1_trim150_scaffold_3237_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 4109..5080

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 322.0
  • Bit_score: 492
  • Evalue 1.40e-136
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 322.0
  • Bit_score: 492
  • Evalue 4.50e-136
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 322.0
  • Bit_score: 497
  • Evalue 1.20e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGACGGCCCTGCAGCGCACGGCCGTGGTACCGCAGGATCTGGCTGGGCAACGTTTCGACCAGGGCGCAGCCCAGTTGTTCCCGGATTGCTCGCGCTCGCGGCTCAGCCGCTGGATCAAGTCCGGCGAGTTGACTCTGGATGGGCGGCAGGCCATGCCCCGGCAGTTGTTGCTCGGTGGCGAGCAGCTGCGCCTGGATGCCGAGCTCGTCGCCGAAACCGGCGACCTGGCCGAGAACATCGCGCTGGCCATCGTGCACGAGGACGCGGACCTGCTGGTATTGAACAAGCCCGCCGGCCTGGTGGTGCATCCTGGGGCCGGCAATCCGGTCGGCACCCTGCTGAATGCCCTGCTGCACCATGATGCCCGGCTCGCCGAGCTGCCACGCGCCGGCATCGTGCACCGGCTGGACAAGGACACTTCCGGCCTGCTGGTGGTGGCCAGGACCCTGCCCGCCTACACGGCACTGGTCGATTTGCTCTCGCGGCATGACGTGGAACGCGAATACGAGGCCGTGGTTCTCGGCGTACTGGTAGCCGGAGGCACCGTGGATGCACCGCTCGGCCGCAGCCGCGGCGATCGTGTGCGCCAGGCGGTGTGCGCGGAAGGCGGGGGCAAGCGCGCCGTGACCCATTACCGGGTCGCCGAGCGCTTTCGGGCCCACAGCCTGATCCACTGTCGCCTGGAGACCGGCCGCACCCACCAGATCCGCGTCCACATGGCGCACATCCACCACCCGCTGCTGGGTGACCCGCTGTATGGCGGCGGGCTCAAGCTGCCCAAGGGCGCATCGGCCGAACTCATTGCCACGCTGCGCGGTTTTCGGCGGCAGGCCCTGCACGCGCGCAAGCTCGGCTTTGTCCACCCGATCAGCGGCCAGCCGATGGAGTTCAGCGCAGAGCGCCCCGCCGACCAGCAGGCCCTGGTCGACGCGCTGCGCGCCGATCTGCTGGAACACCGCAAGGATCCGTGA
PROTEIN sequence
Length: 324
MTALQRTAVVPQDLAGQRFDQGAAQLFPDCSRSRLSRWIKSGELTLDGRQAMPRQLLLGGEQLRLDAELVAETGDLAENIALAIVHEDADLLVLNKPAGLVVHPGAGNPVGTLLNALLHHDARLAELPRAGIVHRLDKDTSGLLVVARTLPAYTALVDLLSRHDVEREYEAVVLGVLVAGGTVDAPLGRSRGDRVRQAVCAEGGGKRAVTHYRVAERFRAHSLIHCRLETGRTHQIRVHMAHIHHPLLGDPLYGGGLKLPKGASAELIATLRGFRRQALHARKLGFVHPISGQPMEFSAERPADQQALVDALRADLLEHRKDP*