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scnpilot_solids1_trim150_scaffold_914_18

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 16237..17133

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYD9_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 289
  • Evalue 3.10e-75
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 289
  • Evalue 9.80e-76
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH89051.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 289
  • Evalue 4.40e-75

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
GTGGCCAGCCTGGACGATTACCGGGTCTTCATCGCCGTGGTGGAACAGGGCAACCTCAGCGCCGCCGCGCGTCACCTGCAGCGCTCGCTGCAGGCGGTGAGCCGCGCGCTGGCGGCGCTGGAACGCGAGCTGGGCGTGGAGTTGATCCAGCGCACCACGCGCCGCGCGCAACCCAGCGCCGCCGGGCTGGCGTTCCACGCGCGGCTGAAGACTGCATTGGCCGACATCGATCTGGCCCGTTCGGAACTGGCCGAACACGGCGCCCGCATCGATGGCGCGCTGCGTATCGGTGGCTCCACCCAGTTCAGTGCGCCGCATCTGGTGCCGGTGGTGGCGGCCTTCATGGAGCGCTATCCGGACGTCGACGTCGAGCTGGTGGTGGCTGACCATCGCGCCGATCTGCAGCGCGAGAAGCTCGACGCCGTGGTGCGGCTGGGCGAATTGCCCGACAGCCGCCTGCATGCGCGCCAGCTCGGCATGCTGCGTGTGGTGACGGTGGGCGCGCCGGGCTACTTCGCCCGGCACGGCCGCCCGCAGACGCCGGCGGATCTGCGGCGGCACCAATGCATCGTGCGCCGCTCGGCCGGGGATGCGCGGCGCTGGAGCTATCGGCGCGGCAGCCGGCGGCAGTCGGTGGAAGTGCATGGCCGCTTCAGCGCCGACAACGCGGCAGCCTGCAACGCGGCGGCGTTGGCCGGGCTCGGCATCGGCGTGGCCGCGCTGTGGCAGGTGCGCAGCCTGCTCGACCAGGGCCGGCTGGAAACCGTGCTGGACGACTGGCAGCTGCCGGGGCAGGCGGTACACATGGTCTGGTCGCCGGCGCGGCAATTGCCGGCGCGCACGCGTGCCTTCATCGACTTCGTGGCGGCGCGCTGGGCGGTCGAGCCGCCGGGTTGA
PROTEIN sequence
Length: 299
VASLDDYRVFIAVVEQGNLSAAARHLQRSLQAVSRALAALERELGVELIQRTTRRAQPSAAGLAFHARLKTALADIDLARSELAEHGARIDGALRIGGSTQFSAPHLVPVVAAFMERYPDVDVELVVADHRADLQREKLDAVVRLGELPDSRLHARQLGMLRVVTVGAPGYFARHGRPQTPADLRRHQCIVRRSAGDARRWSYRRGSRRQSVEVHGRFSADNAAACNAAALAGLGIGVAALWQVRSLLDQGRLETVLDDWQLPGQAVHMVWSPARQLPARTRAFIDFVAARWAVEPPG*