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scnpilot_solids1_trim150_scaffold_1411_23

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(23361..23522)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 52.0
  • Bit_score: 103
  • Evalue 7.50e-20
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL94863.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 52.0
  • Bit_score: 103
  • Evalue 1.10e-19
isopropylmalate/homocitrate/citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 53.0
  • Bit_score: 102
  • Evalue 4.00e-20

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 162
GGCAACGTGGCCAGCGAGGACGTGGTCTACATGCTGCACGGCATGGGCATCGAGACCGGCATCGACCTCGACCTGCTGATCGCCACCGGCGCCTGGCTCGCCGCGCAACTGCACAAGGACACCGCCAGCCGGGTCACCCGCGCGCGCACGGCCGCAAACTAG
PROTEIN sequence
Length: 54
GNVASEDVVYMLHGMGIETGIDLDLLIATGAWLAAQLHKDTASRVTRARTAAN*