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scnpilot_solids1_trim150_scaffold_8295_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1179..3797

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 879.0
  • Bit_score: 1659
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 879.0
  • Bit_score: 1654
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL13_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 879.0
  • Bit_score: 1659
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2619
GTGTTCTCCGGCATTTCGGAGGCGCGTCGCGCCTACGACAATCGCGCGGTGGAACTGCACGCCAAGGTCAAGGTGCGCCTGAAGCAGGTGCACATCGCCGAGGACGGCACCCGCAGCAGCGAAACCCGGCTGGTCGAGACCACCGTCGGTCGCGCACTGCTCGCCGAGATCCTGCCGGAAGGCCTGCCGTTCGAGCTGGCCAACACCGAGCTGACCAAGAAGAACATCTCGCGCCTGATCAATTCCAGCTACCGCCGGCTGGGCCTGAAAGAGACCGTGGTGTTCGCCGACAAGCTGATGTACACAGGCTACCGGTTCGCCACGCGCGCGGGCATCTCGATCGGCATCGACGACATGCTGATTCCGAGCGAGAAGAAGACCATCCTCGACGAGGCCGAGAAGGAAGTCGTCGAGATCCAGCAGCAGTACCAGTCGGGCCTGGTCACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACCAGCGAGCAGGTGGCCAAGGCGATGATCGACGGCATCGGCACCGAGAAGGTGGTTGACGCCGAGGGCAAGACGGTCAGCCAGAAGTCGATGAACTCGCTGTACATCATGGCCGATTCCGGCGCGCGCGGCTCGGTGGCGCAGATTCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCGCGCCCGGACGGCTCGATCATCGAGACGCCGATCAAGGCCAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCAACTCGACCCACGGCGCCCGCAAGGGCCTGGCGGATACCGCGCTGAAGACCGCGAACTCCGGTTACCTGACTCGTCGCCTGGTGGACGTGGCGCAGGACGTGGTCATCACGATGGACGACTGCGGCACCGAGGACGGCATCACCATGCAGCCGATCGTCGAGGGCGGCGACGTGGTCGAACCGCTGCGCGACCGCGTGCTCGGCCGTGTGGTGGTCGAGGACGTCTACGCTCCCGGCGACGACGACCGGCCGATCGTCACCCGCGACACGCTGCTCAACGAAGCGCTGGTCGAGAAGCTCGACAAGGCCGGCGTGCAGATCGTCAAGGTGCGCTCGCCGATTACCTGCGAAGCCATCCATGGCGTGTGCAAGCTGTGCTACGGCCGCGACCTGGCCCGTGGCCACCTGGTCAACATGGGCGAGGCCGTGGGCGTGGTCGCCGCGCAGTCGATCGGCGAGCCGGGCACCCAGCTGACCATGCGCACGTTCCACATCGGTGGCGCGGCTTCGCGCGCGGCGGCGGTGGACAACGTGACGGTGAAGACCACCGGTTCGCTGAAGTTCAACAATCTGAAGTCGGTGCAGCACAAGCAGGGCAACCTGGTGGCGGTGTCGCGTTCGGGCGAACTGAGCGTGATCGACGCCAGCGGCCGCGAGCGCGAGCGCTACAAGGTGCCGTACGGCGCCGTCATCGCGGTCAAGGACGGCGCGCCGGTCAAGCCGGGCCAGACCGTGGCGAACTGGGATCCGCATACCCATCCGATCGTCACCGAGGTGGCCGGCGTGGTGCGCTTCATCGACTTCCTCGATGGCGTCACCGTGCAGAGCCAGACCGACGAGCTGACCGGCCTGGAGTCGGCGGTGGTCACCGATCCGAAGCGTCGCGGCGCGCAGGCGAAGGACCTGCGTCCGATCGTGCGCCTGGAAGACGCCAAGGGCCGCGAGTTGAAGCTGCCGGGCACTGATATCGCCGCGCAGTACTTCCTGCCGGCCGGCGCGATCGTGTCGATCCAGAACGGTGCCGAAGTGGGCGTGGGCGACGTGATCGCGCGCATCCCGCAGGAAACCTCCAAGACCCGCGACATCACCGGCGGCCTGCCGCGCGTGGCCGACCTGTTCGAGGCGCGCAAGCCGAAGGAGCCGGCGATCCTGGCCGAACGCTCCGGCATCGTCAGCTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGATCATCAAGGACGCCGACGGCAACGAGCACGAGGAGCTGATTCCGAAATGGCGTCAGGTCATCGTGTTCGAGGGCGAGCACGTGGAGAAGGGCGAGACCGTCGTCGATGGCGAGCCGAACCCGCACGACATCCTGCGTCTGCTCGGCGTGGAGCCGCTGGCCACGTACCTGGTCAAGGAGATCCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGCGATCATTCGCCAGATGCTGCGCAAGGTCGAGATCGTCGAGCCGGGCGACAGCCACTACCGCGTGCGGATCAACGGCGAGAACGAGCGTGCAATCGCCAAGGACGAGCGGCCGGCAGACTACCAGTCGGTGCTGCTGGGCATCACCAAGGCATCGTTGGCGACCGAATCGTTCATCTCGGCGGCCTCGTTCCAGGAAACCACCCGCGTCCTCACCGAGGCGGCGGTTCGCGGAACGCGCGACAGCTTGCGTGGCCTGAAGGAAAATGTTATCGTCGGACGTCTTATTCCGGCAGGCACGGGTTTGGCGTACCACGCATCGCGTCGTCGCCAAGGCGGCTTGACCGCCACGGAGCTGGAGACTCTTTCCGGCTCCACGCCTGCGGTCTCGTTCGCCGGGGCTCCGGTCGGTGGTGAGAACGGTGTCGAGTAA
PROTEIN sequence
Length: 873
VFSGISEARRAYDNRAVELHAKVKVRLKQVHIAEDGTRSSETRLVETTVGRALLAEILPEGLPFELANTELTKKNISRLINSSYRRLGLKETVVFADKLMYTGYRFATRAGISIGIDDMLIPSEKKTILDEAEKEVVEIQQQYQSGLVTAGERYNKVVDIWSRTSEQVAKAMIDGIGTEKVVDAEGKTVSQKSMNSLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDVVITMDDCGTEDGITMQPIVEGGDVVEPLRDRVLGRVVVEDVYAPGDDDRPIVTRDTLLNEALVEKLDKAGVQIVKVRSPITCEAIHGVCKLCYGRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGSLKFNNLKSVQHKQGNLVAVSRSGELSVIDASGRERERYKVPYGAVIAVKDGAPVKPGQTVANWDPHTHPIVTEVAGVVRFIDFLDGVTVQSQTDELTGLESAVVTDPKRRGAQAKDLRPIVRLEDAKGRELKLPGTDIAAQYFLPAGAIVSIQNGAEVGVGDVIARIPQETSKTRDITGGLPRVADLFEARKPKEPAILAERSGIVSFGKDTKGKQRLIIKDADGNEHEELIPKWRQVIVFEGEHVEKGETVVDGEPNPHDILRLLGVEPLATYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKVEIVEPGDSHYRVRINGENERAIAKDERPADYQSVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDSLRGLKENVIVGRLIPAGTGLAYHASRRRQGGLTATELETLSGSTPAVSFAGAPVGGENGVE*