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scnpilot_solids1_trim150_scaffold_49

Search features with annotation key words

Displaying items 61-90 of 333 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_49_59
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58676..59446
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS8_NIAKG
scnpilot_solids1_trim150_scaffold_49_60
Pseudomonas sp. 2(2015), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59455..60735
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382B395
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJK16706.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2(2015).;"
polysaccharide biosynthesis protein
scnpilot_solids1_trim150_scaffold_49_61
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60738..61841)
DNA (1104bp) protein (368aa)
Acyltransferase 3 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y702_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AII52506.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
acyltransferase 3
scnpilot_solids1_trim150_scaffold_49_62
unknown

Not on your lists

comp(61858..62733)
DNA (876bp) protein (292aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_49_63
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63110..64471)
DNA (1362bp) protein (454aa)
PKD domain containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAH2_CHIPD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACU61176.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_49_64
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

64853..68662
DNA (3810bp) protein (1270aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003755D57
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_49_65
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

68727..73019
DNA (4293bp) protein (1431aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A
scnpilot_solids1_trim150_scaffold_49_66
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

73099..73677
DNA (579bp) protein (193aa)
Ferrochelatase n=1 Tax=Algoriphagus machipongonensis RepID=A3I2P9_9BACT
Ferrochelatase {ECO:0000313|EMBL:EAZ79353.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_49_67
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73985..77362
DNA (3378bp) protein (1126aa)
Adenylate/guanylate cyclase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPI2_HALH1 rbh
guanylate cyclase rbh
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids1_trim150_scaffold_49_68
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77413..78036
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CD468
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHF14063.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_49_69
unknown

Not on your lists

78325..78711
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_49_70
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

78753..79673
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EML4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM44880.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
scnpilot_solids1_trim150_scaffold_49_71
unknown

Not on your lists

79987..80331
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_49_72
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(80459..82303)
DNA (1845bp) protein (615aa)
Hydrolase CocE/NonD family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EM95_RUNSL rbh
hydrolase CocE/NonD family protein; K06978 rbh
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:AEI50533.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_49_73
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82303..84225)
DNA (1923bp) protein (641aa)
Peptidase S15 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC58_CHIPD
peptidase S15; K06978
Peptidase S15 {ECO:0000313|EMBL:ACU59441.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_49_74
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84264..84725
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I5F1_PSEE4
hypothetical protein; K06893
Uncharacterized protein {ECO:0000313|EMBL:CAK17134.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
scnpilot_solids1_trim150_scaffold_49_75
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

85347..88001
DNA (2655bp) protein (885aa)
4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase {ECO:0000313|EMBL:AEV98902.1}; EC=2.4.1.25 {ECO:0000313|EMBL:AEV98902.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-alpha-glucanotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR9_NIAKG
scnpilot_solids1_trim150_scaffold_49_76
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

88014..89075
DNA (1062bp) protein (354aa)
Muconate cycloisomerase {ECO:0000313|EMBL:AEV98901.1}; EC=5.5.1.1 {ECO:0000313|EMBL:AEV98901.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Muconate cycloisomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR8_NIAKG
Muconate cycloisomerase
scnpilot_solids1_trim150_scaffold_49_77
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

89175..89747
DNA (573bp) protein (191aa)
imidazoleglycerol-phosphate dehydratase; K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
imidazoleglycerol-phosphate dehydratase n=1 Tax=Niabella aurantiaca RepID=UPI000381BDDC
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_49_78
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

89774..91126
DNA (1353bp) protein (451aa)
glycosyl hydrolase family 109 n=1 Tax=Pedobacter agri RepID=UPI00029A3098 rbh
Glycosyl hydrolase family 109 {ECO:0000313|EMBL:ETZ22519.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Alpha-N-acetylgalactosaminidase
scnpilot_solids1_trim150_scaffold_49_79
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

91137..92192
DNA (1056bp) protein (352aa)
Aminoglycoside phosphotransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NM07_9SPHI
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AHF14549.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aminoglycoside phosphotransferase
scnpilot_solids1_trim150_scaffold_49_80
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92282..94096)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBR7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01570.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids1_trim150_scaffold_49_81
unknown

Not on your lists

comp(94121..94909)
DNA (789bp) protein (263aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_49_82
unknown

Not on your lists

comp(94920..95390)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_49_83
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95446..96831)
DNA (1386bp) protein (462aa)
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHM63312.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
RagB/SusD domain protein id=5011371 bin=GWA2_Bacteroidetes_42_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_49_84
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(96852..99980)
DNA (3129bp) protein (1043aa)
TonB-dependent receptor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K2U8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHM63311.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_49_85
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(100151..100891)
DNA (741bp) protein (247aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7L5_NIAKG rbh
NUDIX hydrolase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_49_86
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100902..105470)
DNA (4569bp) protein (1523aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037952A6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91233.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
1,4-alpha-glucan-branching protein
scnpilot_solids1_trim150_scaffold_49_87
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(105595..107445)
DNA (1851bp) protein (617aa)
alpha-amylase n=1 Tax=Niabella aurantiaca RepID=UPI00035E2E68 rbh
Alpha-amylase {ECO:0000313|EMBL:AHF15227.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cyclomaltodextrinase rbh
scnpilot_solids1_trim150_scaffold_49_88
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(107474..108850)
DNA (1377bp) protein (459aa)
major facilitator transporter n=1 Tax=Pedobacter agri RepID=UPI00029A5C6E rbh
Major facilitator transporter {ECO:0000313|EMBL:KIA91908.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
major facilitator superfamily protein rbh
Displaying items 61-90 of 333 in total

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