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scnpilot_solids1_trim150_scaffold_49_27

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28545..29096)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BYX2_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 165.0
  • Bit_score: 156
  • Evalue 2.50e-35
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 189.0
  • Bit_score: 151
  • Evalue 3.40e-34
Tax=GWB2_Bacteroidetes_41_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 165.0
  • Bit_score: 157
  • Evalue 1.60e-35

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Taxonomy

GWB2_Bacteroidetes_41_8_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAATAGTAACGGAAACATCTCAACATTCCCACACGTCTTAATTGAACAAGCTGCAAATGGCGATCAACGGGCATTTAAGGAAATTTACAATTCCCTGTCCGGTAAAATGTACAGTTTGTGCCTACGGTATGCACAGGATACTGATACTGCCAATGATTATTTCCAGGAAGGATTCATCAAGCTCTTCAGGAACTTGCCAAATTACAGGTTCGAAGGTTCCTTTGAAGGCTGGGCCCGCAGAATATTTGTTACGGTGTGCTTAGATGAGTTAAGAAAGAAGAAAATATCCTATGATGAGATTAATGATGATATCAATATCGTATCAAAAGAAATAAGTGTTCATGCAAAATTAGATATGCTGGATCTTATTAAATTATTACAAAAAATACCAGATAGTTACCGCACTATTGTGAATCTTTATATTATCGAAGGGTACAGTCATAAAGAAATTGCAGAAATATTAAATATTACGGAAAATGGCAGTAAATCAAAATTGCATAAAGCCCGTATTTATCTTAAAAAATTATTAGGTACGCAAGAAAGTGAATAA
PROTEIN sequence
Length: 184
MNSNGNISTFPHVLIEQAANGDQRAFKEIYNSLSGKMYSLCLRYAQDTDTANDYFQEGFIKLFRNLPNYRFEGSFEGWARRIFVTVCLDELRKKKISYDEINDDINIVSKEISVHAKLDMLDLIKLLQKIPDSYRTIVNLYIIEGYSHKEIAEILNITENGSKSKLHKARIYLKKLLGTQESE*