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scnpilot_solids1_trim150_scaffold_34_16

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 17588..18364

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 256.0
  • Bit_score: 283
  • Evalue 3.60e-73
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 258.0
  • Bit_score: 279
  • Evalue 8.80e-73
Tryptophan synthase alpha chain n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C2B2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 256.0
  • Bit_score: 283
  • Evalue 2.50e-73

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Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 777
ATGAACAGATTAGAAAAACTTTTTGAAAAGAAAAATAAACAACTTTTAAACATATATTTTACTGCCGGTTATCCAAATTTGGAAGATACGTTACCTATCATTTTAGAATTAGATAAAGCCGGTGCAGACCTGATTGAAATTGGGATTCCCTTTAGCGACCCTATGGCAGATGGCCCTACCATTCAGCAAAGCAATCAACAGGCCTTGGATAATGGCATGAGTGTAAACATACTTTTTGATCAGTTAAAGGATGTTAGAAAGTTTACACAGATTTCCCTCGTTTGTATGAGTTATTTAAATCCTATTTTAAAATTTGGCATTGAGAACTTCTGTAAAAAAGCAAAAGCTGTGGGTATTGATGGCATCATTTTGCCGGATATGCCTTTACCTGAATATGAAAATAATTACCAGGCTGTTTTTTCAAAATATGGTATTAATGTATCCTTACTCGTTAGTCCGGATACAGAGGAAAAAAGAATTGCAAAAATTGACAAACTAACCACCGGTTTTATTTATTTAGTAACGGGAAAAGCGGTAACAGGAAGTAATATCAGCCATAACATCACACAGATAAATACTTTAAAAAGAATTGAACAACTTAAACTGAAAAGTCCTGTATTAGCAGGTTTTGGCATAAGCGATGCCGCAGGCTACCAGTTAGTTTGCAAATATGTAAACGGTGCCATCATAGGCAGTGAGTTTATACGATTGCTAAGTAAGAAGTCTAAAAACAGAAAGCAACAGATTGAAAACTTTATTAAAAATATTAAAGCATGA
PROTEIN sequence
Length: 259
MNRLEKLFEKKNKQLLNIYFTAGYPNLEDTLPIILELDKAGADLIEIGIPFSDPMADGPTIQQSNQQALDNGMSVNILFDQLKDVRKFTQISLVCMSYLNPILKFGIENFCKKAKAVGIDGIILPDMPLPEYENNYQAVFSKYGINVSLLVSPDTEEKRIAKIDKLTTGFIYLVTGKAVTGSNISHNITQINTLKRIEQLKLKSPVLAGFGISDAAGYQLVCKYVNGAIIGSEFIRLLSKKSKNRKQQIENFIKNIKA*