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scnpilot_solids1_trim150_scaffold_181_16

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 12901..14373

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK09_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 498.0
  • Bit_score: 702
  • Evalue 3.30e-199
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 498.0
  • Bit_score: 702
  • Evalue 1.00e-199
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 497.0
  • Bit_score: 708
  • Evalue 5.00e-201

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1473
ATGGCTCTACAGCAAAACCTCCAGCAAAAACTATTACAAAAATTATCGCCCCAGCAAATTCAGTTGATGAAATTGTTGCAGGTACCTACCGCCATTTTAGATGAAAGAATAAAAGAAGAAATGGAAGAAAATCCGGCTTTGGAGCAGGGTGATGAAACCTATGAAGATGAATTTAATAACGAGGAGGATAATATACCCGATGAAGATTATGAAAAAGATGGCAGCCAGGACGATTATGATAATATTGATATCACCGAATATGTACATGAAGGCGATGATGAAATAGGCGATTACCGCTTGCGGGACACCAATTATCCCGAGCAGGATGAGAGCAGGGTAACTCCCCATAAAGTGGAAGTGAGTTTTATGGAGCTCATGCTGCAGCAGCTGGGAATGCTCACCCTTACAGAACACCAGCGAAAAGTGGCCATACAAATAATCGGCAGTTTGGATGACGATGGTTATTTGCGCAGGGAAATAGATTCTATTATTGATGACCTGGCCTTTAGGCAAAATGTAAATACCGATGAAGAAGAAATAGCAGACCTGTTGGTTCAAATTCAACAGTTTGACCCACCCGGTGTAGGCGCCAGGAATTTACAGGAATGTTTATTATTGCAACTGGAAAGAAAAGAACAAACGCCTACGATCAAATTAGCGATCAAGGTACTCGAAAAATACTTTGAAGAGTTTACAAAAAAACATTACGAAAAAATACAAAAAGCGTTTGACCTGTCAGATGAAGACCTGCGGGAAATTATTGCACAAATCGTAAAGCTAAACCCTAAGCCCGGGAATACAGGTGATTCAGGAAAAAATAGAAACTACATTATACCCGATTTTTTTATTGTAAATAATAATGGTAAGCTGGAGCTCTCATTAAACAGTAAAAACGCACCCGATTTGCGGATCAGCGACGGCTACCGGGATATGCTGAAAGATTATGAAAGGGGCAGCAAAAAAGATAAACGCCAAAAAGAAGCAGTTCTCTTTATTAAACAAAAGATCGACTCAGCAAAATGGTTTATTGATGCCATTAAGCAAAGGCAAAATACATTACTAAATACCATGGAAGCCATCATGAATTACCAGCATGATTTCTTTGTAACCGGCGATGAGACCAACCTGCGCCCCATGATATTAAAGGATATTGCAGAAACAACCCATTTAGATATTTCCACCGTTAGCCGTGTGGCCAATAGCAAGTTTGTGCAAACAGAATTTGGCACATTCCGATTAAAATTTTTCTTTAGCGAAAGCCTCCAAACGGACAGTGGCGAAGAAGTAAGCACCCGTGAAGTGAAAAAAATTTTAACCGACCTCATTGATGAGGAAACCAAAAACCATCCTTATAGCGATGAAAAACTTACAGAATTACTTCAGGAAAAAGGATATAATATTGCTCGCCGGACGGTAGCTAAATACCGGGAACAATTAAATATACCGGTAGCCCGGTTACGTAAAATTCTTTAA
PROTEIN sequence
Length: 491
MALQQNLQQKLLQKLSPQQIQLMKLLQVPTAILDERIKEEMEENPALEQGDETYEDEFNNEEDNIPDEDYEKDGSQDDYDNIDITEYVHEGDDEIGDYRLRDTNYPEQDESRVTPHKVEVSFMELMLQQLGMLTLTEHQRKVAIQIIGSLDDDGYLRREIDSIIDDLAFRQNVNTDEEEIADLLVQIQQFDPPGVGARNLQECLLLQLERKEQTPTIKLAIKVLEKYFEEFTKKHYEKIQKAFDLSDEDLREIIAQIVKLNPKPGNTGDSGKNRNYIIPDFFIVNNNGKLELSLNSKNAPDLRISDGYRDMLKDYERGSKKDKRQKEAVLFIKQKIDSAKWFIDAIKQRQNTLLNTMEAIMNYQHDFFVTGDETNLRPMILKDIAETTHLDISTVSRVANSKFVQTEFGTFRLKFFFSESLQTDSGEEVSTREVKKILTDLIDEETKNHPYSDEKLTELLQEKGYNIARRTVAKYREQLNIPVARLRKIL*