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scnpilot_solids1_trim150_scaffold_17

Search features with annotation key words

Displaying items 91-120 of 413 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_17_91
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88562..89251
DNA (690bp) protein (230aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
Dienelactone hydrolase-like enzyme n=1 Tax=Acidovorax sp. CF316 RepID=J1ENY2_9BURK rbh
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJE53874.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_solids1_trim150_scaffold_17_92
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89286..91685)
DNA (2400bp) protein (800aa)
hypothetical protein n=1 Tax=Klebsiella pneumoniae RepID=UPI0002EBD0F1
DNA helicase protein {ECO:0000313|EMBL:CDM79695.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_17_93
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91772..93523)
DNA (1752bp) protein (584aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8F9_ACIAP rbh
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADX48272.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_17_94
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93496..95766)
DNA (2271bp) protein (757aa)
Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q1_ACIDE rbh
extracellular sensor-containing diguanylate cyclase/phosphodiesterase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_17_95
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95951..96274)
DNA (324bp) protein (108aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q2_ACIDE
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:EER59856.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
response regulator receiver and ANTAR domain-containing protein; K07183 response regulator NasT
scnpilot_solids1_trim150_scaffold_17_96
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96550..98451)
DNA (1902bp) protein (634aa)
signal transduction histidine kinase id=12551795 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
pas sensor protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_17_97
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98494..100059)
DNA (1566bp) protein (522aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB56_ACIET
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ACM31740.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_17_98
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100080..101333)
DNA (1254bp) protein (418aa)
hemolysin D n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003601FBE rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:GAD21134.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A rbh
scnpilot_solids1_trim150_scaffold_17_99
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101430..101921)
DNA (492bp) protein (164aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TVG3_ALIDB
regulatory protein marr
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEB82769.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_17_100
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102014..104698)
DNA (2685bp) protein (895aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H7_ALIDK rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEB86702.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_17_101
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105016..106644)
DNA (1629bp) protein (543aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YE0_RHOFD
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD69213.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_solids1_trim150_scaffold_17_102
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106841..108817)
DNA (1977bp) protein (659aa)
Putative multicopper oxidase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKX1_9GAMM
putative multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:AGG90727.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_17_103
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108937..109950)
DNA (1014bp) protein (338aa)
delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
Delta-aminolevulinic acid dehydratase n=3 Tax=Comamonas testosteroni RepID=D0IWM2_COMT2 rbh
scnpilot_solids1_trim150_scaffold_17_104
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109997..110692
DNA (696bp) protein (232aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Biotin/lipoate A/B protein ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVG6_ALIDB
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:GAO26082.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_17_105
Neisseria wadsworthii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110747..111133)
DNA (387bp) protein (129aa)
MAPEG family protein n=1 Tax=Neisseria wadsworthii 9715 RepID=G4CNI1_9NEIS
MAPEG family protein {ECO:0000313|EMBL:EGZ49995.1}; TaxID=1030841 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria wadsworthii 9715.;"
putative MAPEG superfamily protein related to glutathione S-transferase
scnpilot_solids1_trim150_scaffold_17_106
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111191..112015)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CFC7A
Uncharacterized protein {ECO:0000313|EMBL:GAD21858.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_17_107
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112136..114070
DNA (1935bp) protein (645aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family id=1278963 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Fis family GAF modulated sigma54 specific transcriptional regulator rbh
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_solids1_trim150_scaffold_17_108
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114233..116035
DNA (1803bp) protein (601aa)
potassium transport flavoprotein; K07222 putative flavoprotein involved in K+ transport id=5081614 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
FAD/NAD(P)-binding domain-containing protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_solids1_trim150_scaffold_17_109
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116057..116476)
DNA (420bp) protein (140aa)
cinA; putative competence/damage-inducible protein CinA id=12551270 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:GAD21861.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cina domain protein; K03743
scnpilot_solids1_trim150_scaffold_17_110
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116600..117691)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLF4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37330.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
scnpilot_solids1_trim150_scaffold_17_111
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117778..118308)
DNA (531bp) protein (177aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27]
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phosphatidylglycerophosphatase A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8K2_ALIDK
scnpilot_solids1_trim150_scaffold_17_112
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118305..119903)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037AF736
Uncharacterized protein {ECO:0000313|EMBL:GAD21864.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_17_113
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119984..120781
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVF5_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO25392.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_17_114
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120807..123020)
DNA (2214bp) protein (738aa)
Transcriptional regulator, CdaR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNX8_METPP rbh
Sugar diacid regulator {ECO:0000313|EMBL:EWS53731.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
CdaR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_17_115
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123055..124092)
DNA (1038bp) protein (346aa)
D-arabitol-phosphate dehydrogenase {ECO:0000313|EMBL:EWS53732.1}; EC=1.1.1.301 {ECO:0000313|EMBL:EWS53732.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Zinc-binding dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNX9_METPP rbh
zinc-binding dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_17_116
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124096..125394)
DNA (1299bp) protein (433aa)
Malate dehydrogenase {ECO:0000313|EMBL:EWS59868.1}; EC=1.1.1.37 {ECO:0000313|EMBL:EWS59868.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
malate dehydrogenase (NAD) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase (NAD) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNY0_METPP rbh
scnpilot_solids1_trim150_scaffold_17_117
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125391..126008)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNY1_METPP rbh
hypothetical protein rbh
BMC domain protein {ECO:0000313|EMBL:EWS59867.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
scnpilot_solids1_trim150_scaffold_17_118
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126009..126902)
DNA (894bp) protein (298aa)
Ethanolamine utilization protein EutJ n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNY2_METPP rbh
Ethanolamine utilization protein EutJ {ECO:0000313|EMBL:EWS59866.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
ethanolamine utilization protein EutJ; K04024 ethanolamine utilization protein EutJ rbh
scnpilot_solids1_trim150_scaffold_17_119
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126902..128299)
DNA (1398bp) protein (466aa)
ethanolamine utilization protein EutE (EC:1.2.1.10) rbh
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:ABM97272.1}; EC=1.2.1.10 {ECO:0000313|EMBL:ABM97272.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Acetaldehyde dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNY3_METPP rbh
scnpilot_solids1_trim150_scaffold_17_120
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128484..128801)
DNA (318bp) protein (106aa)
Putative carboxysome structural-like protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNY4_METPP
Propanediol utilization protein PduA {ECO:0000313|EMBL:EWS66424.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
putative carboxysome structural-like protein; K04027 ethanolamine utilization protein EutM
Displaying items 91-120 of 413 in total

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