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scnpilot_solids1_trim150_scaffold_55_1

Organism: SCNPILOT_SOLID_1_TRIM150_Castellaniella_66_22

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3..350

Top 3 Functional Annotations

Value Algorithm Source
Putative methyl-accepting chemotaxis protein II n=2 Tax=Bordetella pertussis RepID=V8VBZ5_BORPT similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 117.0
  • Bit_score: 118
  • Evalue 6.30e-24
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:CDM24236.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 111.0
  • Bit_score: 151
  • Evalue 5.50e-34
methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 122.0
  • Bit_score: 117
  • Evalue 3.40e-24

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
GGCAACGAGCAGGCCGCCCATGCCGGCGACACCATGCAGGAGATCGTCGACAGCATCAACCGCGTCACCGACATCATGGGCGAGATCAGCGCCGCCAACCGCGAGCAGACCACCGGCATCGAGGAAATCAATTCCGCCATCACCCAGATGGACGACGTCACCCGGCAGAACGCCAGCCTGGTCGAAGAGTCCGCCACGGCCGCCGCCAGCCTCAGGGAACAGGCCGAGACGCTGGCCCGGCTGGTGGGTACCTTCAATCTGGGCGACCCGGCCGATGCGCCGGTCGGGATTCCGCATCACGGCGGCGTCCCGCCGGCCGCGCCACGCCTGCTGGCCGCGCCGGCGTAA
PROTEIN sequence
Length: 116
GNEQAAHAGDTMQEIVDSINRVTDIMGEISAANREQTTGIEEINSAITQMDDVTRQNASLVEESATAAASLREQAETLARLVGTFNLGDPADAPVGIPHHGGVPPAAPRLLAAPA*