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scnpilot_solids1_trim150_scaffold_55_34

Organism: SCNPILOT_SOLID_1_TRIM150_Castellaniella_66_22

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(42887..43408)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030D6350 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 161.0
  • Bit_score: 155
  • Evalue 5.40e-35
NusG antitermination factor similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 142
  • Evalue 1.50e-31
Transcription antitermination protein nusG {ECO:0000313|EMBL:ABM38432.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 142
  • Evalue 6.60e-31

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGTCAGCAGACTCCATTGCCTCCGCCTGGTACGTCGTCCACACCAAACCGCGCCAGGAATCGGTGGCGCGGGAACAGTTGCTGCGCCAGGATTTCGAGGTCTATCTGCCGCTGTTCAAGGTCTTCAGGAAACCGCGCGCGGCGCCCGGCGGCCTGACCGCGCATGAACCGATGTTCCCTCGCTACCTGTTCCTGCGTCCCACGCGGCCCACGCAGTCGCTGTCGGTCGTGCGCTCCACCGTCGGGGTCAGCCGCCTGGTGATGTTCGGCCCGCAGCCCGCCGCCCTGGCCGACGCTGCCGTGCAGGCGATCCGCCAGGCCGAAACCCTGCGCGAAGCCGCGCAAATGGACCAGATCAGCCCCTTCCAGCCCGGCATGCCGGTGCAGATCCAGGACGCCCCCCTGGCCGGCATCCAGGCCCTGGTGCAGGCCGTCTCCAAAGACCGCGTCACCCTGCTGCTGGACATCCTGGGCCGCCCGCAGACCGTCCAGGTCGAGTTCGGGCAGATTGCGCCGCTGTGA
PROTEIN sequence
Length: 174
MSADSIASAWYVVHTKPRQESVAREQLLRQDFEVYLPLFKVFRKPRAAPGGLTAHEPMFPRYLFLRPTRPTQSLSVVRSTVGVSRLVMFGPQPAALADAAVQAIRQAETLREAAQMDQISPFQPGMPVQIQDAPLAGIQALVQAVSKDRVTLLLDILGRPQTVQVEFGQIAPL*