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scnpilot_solids1_trim150_scaffold_15557_1

Organism: SCNPILOT_SOLID_1_TRIM150_Castellaniella_66_22

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 2..1051

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EZR8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 349.0
  • Bit_score: 610
  • Evalue 1.20e-171
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGE69525.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 351.0
  • Bit_score: 607
  • Evalue 1.10e-170
virD4; Type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 352.0
  • Bit_score: 599
  • Evalue 5.20e-169

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
CGCTCCGGCGTGCTCTCCACGGCCATGTCGTTCCTTGGCCTGTACCGCGATCCGACGGTGGCGGAAGTCACCTCGCGCTGCGACTGGCGCATCGCCGATCTGATCGCCTCCGACCACCCCGTTTCGCTGTACCTGGTGGTGCCGCCTTCGGACATCTCGCGCACGAAGCCGCTCATCCGTTTGATCCTCAACCAGATCGGTCGGCGTCTGACCGAATCGCTCGACGGTAGCGACGGCATCGAGCGGCGCCACAAGTTGCTGCTGATGCTCGACGAGTTTCCGGCGCTTGGGCGCCTGGACTTCTTCGAGACGGCGCTGGCCTTCATGGCGGGCTACGGCATCCGCAGCTTCCTCATCGCGCAGTCGCTCAACCAGATCGACAAGGCCTACGGCCAGAACCATTCGATCCTCGACAACTGCCATGTGCGGGTGACGTTCGCCACCAACGACGAGCGCACCGCCAAGCGCATCTCCGACACGTTGGGCACCTCGACTGAGCTTCGCGCGCAGCGCAACTACGCAGGCCACCGGCTCGCACCGTGGCTCGGGCACCTGATGGTGTCGCGCCAGGAAACGGCGCGACCGCTGCTGACGCCCGGCGAGGTCATGCAGCTCCCGCCCGACGAAGCCGTGGTGATGGTGTCCAGCGTGGCGCCGATCAAGGCGAAGAAGCTGCGCTACTACGCCGACGCCAACTTCAAGCGCCGTGTGCTGCCGCCTCCGGTACTTGCCGACGAGCGCTATGCCGATACGCCGCCCGCACGGCCCGACGACTGGAGCGGGCTGGCGATTCCTGCTGTCCCGGTGGTACCGGCTGTGGACGACCTGACCGAGAGCGGTATCGGCTCGGGCACTTCCGATGACGGCGGCCTGCGCCGGCAACCGGAACTCGCCGACGTTGCCGAATACAGCCCCGAACAGCAGGCCACCGACAGCGACCTGGCGCTGCTAGATGACGACGATCCGCCGCTGCCTGGCGAGTTCAGCCCGGCCATGCAGCGTACGTCGCGATTGGCCTCACTCGATCAACACGACGGGATCGAACTATGA
PROTEIN sequence
Length: 350
RSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASDHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISDTLGTSTELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYADANFKRRVLPPPVLADERYADTPPARPDDWSGLAIPAVPVVPAVDDLTESGIGSGTSDDGGLRRQPELADVAEYSPEQQATDSDLALLDDDDPPLPGEFSPAMQRTSRLASLDQHDGIEL*