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scnpilot_solids1_trim150_scaffold_134_43

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(55994..57076)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system permease protein lptF n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0STE7_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 361.0
  • Bit_score: 532
  • Evalue 4.40e-148
  • rbh
Lipopolysaccharide export system permease protein lptF {ECO:0000313|EMBL:CCP39363.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 361.0
  • Bit_score: 532
  • Evalue 6.10e-148
putative transmembrane permease; K07091 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 360.0
  • Bit_score: 530
  • Evalue 4.00e-148
  • rbh

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGGCGAAGCTTGACCGCTACCTGCTGAGCGACTTCATCCAGAGCTTCCTGGCGACCCTGACCGTGCTGCTGGTGGTGAGCGTGGGGGGGGTCCTGGTGGACATCCTGGGCCGGATTGCCGACGGCCGCATGCCGGCCGGGCTGCTGCTGTCGCAGCTGGGCCTGCAGTTCATCGTCTACCTGCCCATCATCCTGCCGCTGGCGCTGCTGCTCGGCCTGTCGCTGGCCATCGCCCGGCTCTACCGGGATTCGGAGATGGCGGTGCTGACCGCGGTGGGGGTCGGCCCGCGGCGCCTGCTGCGGCCGGTCATGATGCTGGTGGCGCCGGTGGTGGCGGTGGTCGGGGCCTGCTCGCTGTGGCTGGGGCCCTGGGCCAACCGCACCGCCGACGCGATGGTCGAGGCCGCCAGCCGCAGCGTGGTGGTGGCCGGGCTGGAGCCGGGCAAGTTCACCCAGCTCTCCGGCGGCGGCATCGTCTACCTGTCCTCGCTCAACGAGGACGGGACCCGGATGGGCAAGGTGTTCATCCAGCGGCAGGAGGACGGGCGCATCGACGTGGTCTCGGCCAACAGCGGCGCCATGTTCTTCGAGGGCGATCGCCAGCGCTTCCTGCGGCTGGAGGACGGCCACCGCGTCGAAGGCCCCGAGAACGGCGGGCTGGATTACCGCCTGATGCGCTACGCCAGCAACGAGGTGGCGTTGCCCGACCGCGATGAAGCGCGCGGCCAGGACGACCCCGAGGTGCTGCCGACCCTGCGCCTGCTCGGCGACGACCGGCGCGAGGCGCAGGCGCAGCTGCACTGGCGCATCACCCCGCCGCTGCTGGCGCTGGCCTTCGCCCTGCTGGCGCTGCCGCTGTCGCGCAGCACGCCGCGGCAGCAGCGCTATGGAAGCGTCATGCTGGCCTTCCTCGGCTACGTGGTGGGCATCAGCCTGATGATCAGCGGCCGGCAATGGCTGGCCAGCGGCAAGCTGCCGATGGAGCTGGGCATGTGGTGGCTGACCGTGCCGCTGCTGGCGCTGGCGCTGTGGCTGTACTTCCGCGATGGCCGGCTGTCGCGCCGCAAGGGGGCACGCGCATGA
PROTEIN sequence
Length: 361
MAKLDRYLLSDFIQSFLATLTVLLVVSVGGVLVDILGRIADGRMPAGLLLSQLGLQFIVYLPIILPLALLLGLSLAIARLYRDSEMAVLTAVGVGPRRLLRPVMMLVAPVVAVVGACSLWLGPWANRTADAMVEAASRSVVVAGLEPGKFTQLSGGGIVYLSSLNEDGTRMGKVFIQRQEDGRIDVVSANSGAMFFEGDRQRFLRLEDGHRVEGPENGGLDYRLMRYASNEVALPDRDEARGQDDPEVLPTLRLLGDDRREAQAQLHWRITPPLLALAFALLALPLSRSTPRQQRYGSVMLAFLGYVVGISLMISGRQWLASGKLPMELGMWWLTVPLLALALWLYFRDGRLSRRKGARA*