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scnpilot_solids1_trim150_scaffold_354_31

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(36929..37291)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional repressor ytrA n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0T3F8_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 230
  • Evalue 1.20e-57
HTH-type transcriptional repressor ytrA {ECO:0000313|EMBL:CCP42175.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 230
  • Evalue 1.70e-57
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 120.0
  • Bit_score: 221
  • Evalue 1.30e-55

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGAGCGATATCCAGTGGAGCGATGGCGCTCCCATCTACCGCCAGCTGAAGGATCGCGTGATCGCGATGATGCTGGACGGGGTCATCAAGCCGGGTGACGCCCTGCCCTCGGTACGCCAGGTGGCGGCCGAGTACCAGTTGAACCCGATCACGGTCTCGCGCGCCTACCAGGAACTGGCCGACGAGAACCTGGTCGAGAAGCGCCGCGGCCTGGGCATGTTCATGACCGAGGAAGCCGCGCGCAAACTGCGCGGCAGCGAGCGCGACCGTTTTCTCAATGAAGAGTGGCCCGGCGTGCTGGAACGCATCCAGCGCCTGGGCCTGACCTTGGAAGATCTGCTGCCACCGGGGACCACACCATGA
PROTEIN sequence
Length: 121
MSDIQWSDGAPIYRQLKDRVIAMMLDGVIKPGDALPSVRQVAAEYQLNPITVSRAYQELADENLVEKRRGLGMFMTEEAARKLRGSERDRFLNEEWPGVLERIQRLGLTLEDLLPPGTTP*