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scnpilot_solids1_trim150_scaffold_63_3

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(6142..7281)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSK8_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 378.0
  • Bit_score: 520
  • Evalue 1.80e-144
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 378.0
  • Bit_score: 520
  • Evalue 5.70e-145
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV27222.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 378.0
  • Bit_score: 520
  • Evalue 2.50e-144

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGTCGCCACTCCTTACCCCGTACGGCCGCACCGGACGCTGCGCCGCCGCTCTCCTCGTCACCACGGTGCTGCTGCTGGGCGGCTGCAAGGCCGATGGCGAGGGCGCCAAGGACACGCCCAAGGAAGCGCAGAAGGCCAGCGATGCGGTCCCGGTCGAAGTGGCCAAGGCGGCGCGCCGCGCCATCGCCGCCAGCTATACCGGTACCGCCTCGCTGGAGCCGCGCGCCGAGTCGCAGGTGGTCGCCAAGACCTCGGGCGTGGCGCTGGCGGTGATGGTCGAGGAAGGCCAGCGCGTCAGCGCCGGGCAGCCGCTGGTGCGGCTGGATCCGGACCGCGCGCGCCTGGCCGTGGCGCAGAGCGAAGCGCAGATGCGCAAGCTGGAAAACAGCTACCAGCGCGCACAGAAGCTGGTCCAGCAGCAGCTGGTCAGCGCCGCCGACGTCGACCAGCTGCGCTTCGACCTGGAAAACGCGCGCGCGCAGTACCGCATGACGGCACTGGAGCTGTCCTACACCACGGTGGTGGCGCCGATTTCCGGCGTGATCGCTTCGCGCGACATCAAGCCGGGCAACTTCGTGCAGATCAACTCGCCGATCATCCGCATCGTCGATGCCGGCAAGCTGGAAGCCACGCTCAACGTGCCCGAGCGCGAGATCGCCAAGCTCAAGCCGGGACAGGCGGTTGAACTGGTCGCCGACGCGTTGCCGGGACGCAGGTTCGGGGGTGTCGTGGACCGCGTGTCGCCGGTGGTGGACACCGGCACCGGCACGTTCCGCGTGGTGGCTTCGTTCTCGGGCGAGAGCGACCTGCAGGCGGGCATGTTCAGCCGCCTGAGCATCAATTACGACCAGCGCGCCGATGCGCTGGTGGTACCGCGCACCGCACTGCTCGAGGACGGCGGCGAGCCTGCCGTGTACGTGGTGCGCGACGGCAAGGCGATGCGTACCCGGCTCAAGCTGGGCTACGACGATGCCGGTTGGATCGAAGTGCGCGAAGGCCTGCAGCCCGGCGAGGAAGTGGTCGTGGCCGGCAAGGCGGCACTGCGCGAGGGCAGCGCGGTTCAGGTGATCGGCAAGGAAAAGGCGGTCGCCGCCGCCGTTCCCGCCAAGGCGCCGGCCGCACAGGCGGCCAAGCAATGA
PROTEIN sequence
Length: 380
MSPLLTPYGRTGRCAAALLVTTVLLLGGCKADGEGAKDTPKEAQKASDAVPVEVAKAARRAIAASYTGTASLEPRAESQVVAKTSGVALAVMVEEGQRVSAGQPLVRLDPDRARLAVAQSEAQMRKLENSYQRAQKLVQQQLVSAADVDQLRFDLENARAQYRMTALELSYTTVVAPISGVIASRDIKPGNFVQINSPIIRIVDAGKLEATLNVPEREIAKLKPGQAVELVADALPGRRFGGVVDRVSPVVDTGTGTFRVVASFSGESDLQAGMFSRLSINYDQRADALVVPRTALLEDGGEPAVYVVRDGKAMRTRLKLGYDDAGWIEVREGLQPGEEVVVAGKAALREGSAVQVIGKEKAVAAAVPAKAPAAQAAKQ*