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scnpilot_solids1_trim150_scaffold_109_97

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 121863..122378

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U4C7_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 289
  • Evalue 3.10e-75
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 289
  • Evalue 4.30e-75
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 288
  • Evalue 1.60e-75

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAGAAAGATTCCGAGCGCCGGATCCTGCTGGGCAGGGTGACCGGCGCTTTTGGTGTGCGCGGCGAGCTCAAGCTCGAGTCCTGGACCGAGCCGCGGCTGGCCATTTTCAACTATCAGCCCTGGATCCTGCGCAGCCCCTCGGGGCAGGAGTCGCAGATCACCGGCGTGCGCGGCCGCGAGGCCGGCAAGACGCTGGTGGCGACCTTCCCCGGGGTGGACGACCGCAACATGGTCGAGGCCATGCGCGGTACCGAGATCCATATCCCGCGCAGCGCGCTGCCGCCGCCCAGGCCGGACGAGTACTACTGGGTCGACCTGGAGGGCCTGGACGTGCAGACCGTGGACGGCGTCAAGCTGGGCCGCGCCTCGCACCTGTTCAACACCGGCGCCAACGACGTGCTGGTAGTGCGCGGCGACCGCGAGCGCATGGTGCCGTTCGTGATGGACGATTTCGTCAAGTCGGTCGATTTCGACGCCAACCTGATCGTGGTCGACTGGGATCCGGAGTTCTGA
PROTEIN sequence
Length: 172
MKKDSERRILLGRVTGAFGVRGELKLESWTEPRLAIFNYQPWILRSPSGQESQITGVRGREAGKTLVATFPGVDDRNMVEAMRGTEIHIPRSALPPPRPDEYYWVDLEGLDVQTVDGVKLGRASHLFNTGANDVLVVRGDRERMVPFVMDDFVKSVDFDANLIVVDWDPEF*