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scnpilot_solids1_trim150_scaffold_1852_3

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(4820..5104)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT6_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 88.0
  • Bit_score: 145
  • Evalue 2.30e-32
Helix-turn-helix protein {ECO:0000313|EMBL:EGD17360.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 88.0
  • Bit_score: 145
  • Evalue 3.30e-32
XRE family transcripitonal regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 78.0
  • Bit_score: 101
  • Evalue 2.10e-19

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Taxonomy

Xanthomonas gardneri → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGTCCGAAAAGAGAGAGCTCCCCGTCTACAGCGTGCGTCTGCGCGAAGCGCGGGAGACCTATGGCATCTCGCAGCGCAATCTCGGCATCAAGGCCGGACTGGATGATTTCGTCGCCAGCACCCGCGTAAACCGCTATGAAACCGGCGTACACCAGCCCGACCTGCAGACCCTGCAGCGCATCGCCGACGTGCTCGACCTGCCGGTGGCGTACTTCTTCGCCGAGGACGACGCGCTGGCGGAACTGATCAAGGCATACAGGCGCGGCAAGTCGCGCAAGAGCTGA
PROTEIN sequence
Length: 95
LSEKRELPVYSVRLREARETYGISQRNLGIKAGLDDFVASTRVNRYETGVHQPDLQTLQRIADVLDLPVAYFFAEDDALAELIKAYRRGKSRKS*