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scnpilot_solids1_trim150_scaffold_1155_9

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 9133..9996

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI0003783279 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 286.0
  • Bit_score: 300
  • Evalue 1.30e-78
  • rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:AKC86990.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 288.0
  • Bit_score: 369
  • Evalue 5.50e-99
helix-turn-helix protein RpiR:sugar isomerase (SIS) similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 286.0
  • Bit_score: 296
  • Evalue 1.00e-77

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGTTCGACATCGTCTACGAACTGCGCCAACGGCTGCACGAATTCAGCCCGGTCGAAGCCCGCATCGCCAACACCATCCTCGCCGACGTCGATGCCGCCGCCCAGTACGGCGTGACCGAGCTGGCCGAGCGCGCCGAGGTCAGCGCCGCGGCGATCTCGCGCTTCGCCAAGACCCTGGGCTGCGAACACGTGCGCGAACTGCGCGCGCGCCTGGCTTCGGCCAGCGCGGTCGGCAAGCGCTTCCTGGAGCAGCAGAACGCGCCACCGGTATCGGCGCTGTTCGCGCAGATCTGCGACGACATCCAGGCCAGCCTGCGCCACAACCTGGCCAACCTGCAGGAAGACGTGGTGCAGCAGCTGGCCGATGCGATCTGCCAGGCGCGGCGCATCCACGTGTTCGGCATCGGCGGCTGTTCCACCGTGTTCTCGCAGGAACTGCAGAACCGGCTGATGCGCTTCGGCCTGCCGATCACCGCCTGCAGCGACGCGGTGGTGATGAAGATGACCGCCGCCATCCTCGGCCCGCAGGACCTGGTGTTGGCGCTGTCGGTCAGCGGCATCACCCCGGAAGTGATCTCGGCGGTGGAGATCGCGCGCACCTACGGCGCGCGGGTCGGCGCCATCACCCGCGCCGGGACGCCGCTGGCCGGGCTGAGCGACTGGCTGCTGCCGATCAGCATCGAGGAAACCGATTTCGTGTTCAAACCCTCCGCCTCGCGCTACGCGATGATGCTGGCGATCGACGTGCTGGCCACCACCACCGCGCTCAACGGCGCCAGCGAGAACCACGAGCACCTGCGTCGCATCAAGCTGGCGCTGGACCGCTACCGGGGCGGCGACTCGCGCCTGCCGCTGGGCGACTGA
PROTEIN sequence
Length: 288
MFDIVYELRQRLHEFSPVEARIANTILADVDAAAQYGVTELAERAEVSAAAISRFAKTLGCEHVRELRARLASASAVGKRFLEQQNAPPVSALFAQICDDIQASLRHNLANLQEDVVQQLADAICQARRIHVFGIGGCSTVFSQELQNRLMRFGLPITACSDAVVMKMTAAILGPQDLVLALSVSGITPEVISAVEIARTYGARVGAITRAGTPLAGLSDWLLPISIEETDFVFKPSASRYAMMLAIDVLATTTALNGASENHEHLRRIKLALDRYRGGDSRLPLGD*