ggKbase home page

scnpilot_solids1_trim150_scaffold_1155_11

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 11509..11904

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U09_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 214
  • Evalue 7.40e-53
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKC86989.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 263
  • Evalue 1.90e-67
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 214
  • Evalue 2.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGAGCGACATCAAGCGTTACGGCGCCGAGGGCGGGGTCGGCCAGGGCCGCCAGCACATGCCGTTTTCGCGCGCGGTCGAGGCCGACGGCTGGCTGTACGTTTCCGGCCAGGTACCGATGCGCGACGGCGAACTGGTCGGCGGCACCGTGACCGAGCAGGCGCATGTGGCCATCGGCAACGTGATGGCGATCCTCGCCGAGGCCGGCTACGGCCCCGAGCACGTGGTGCGCTGCGGCGTATGGCTGGACGACGCCCGCGATTTCTACGCGTTCAACAGCGTGTTCAAGCACTATTTCGGCGAGCACCCGCCGGCACGCGCCTGCGTGGAGAACCGCATGGTAGTGGACTGCAAGGTGGAAGTGGACTGCGTCGCCTGGAAGCGCCCGCCGCGCTGA
PROTEIN sequence
Length: 132
MSDIKRYGAEGGVGQGRQHMPFSRAVEADGWLYVSGQVPMRDGELVGGTVTEQAHVAIGNVMAILAEAGYGPEHVVRCGVWLDDARDFYAFNSVFKHYFGEHPPARACVENRMVVDCKVEVDCVAWKRPPR*