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scnpilot_solids1_trim150_scaffold_3305_2

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(1986..2906)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z6P1_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 297.0
  • Bit_score: 373
  • Evalue 2.90e-100
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP42689.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 302.0
  • Bit_score: 374
  • Evalue 1.80e-100
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 294.0
  • Bit_score: 363
  • Evalue 9.40e-98
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGAAGCAGGACTTCACAATAGACCCCTCCCTGCTGCCGGCACTGGCGGCCTTCGCCTGCGTCGCGCGCCACGCCAGCTTCAGCCGGGCGGCGATCGAACTGGGCATGTCGGCCTCGGCGGCGTCGCAGTCGGTGCGCACCCTGGAGCGGCGGCTGGGCGTGCGCCTGCTGCACCGGACCACGCGCCGGGTCGGGCTGACCGAGCCGGGCGAGCGCCTGCTGCGCGAAGCCGCACCCGCCCTGGCGCGCATCGGCGGCGCGCTGCAGGCACTGGAGGAAAGCCGCGACGTGCCCGCCGGGCGCCTGCGCATCACCGCGCCGCGGATCGTGGTCGAACAGATGCTGCTGCCGCACCTGCCGGCGTTCTCCGCGCGCTTTCCCCATGTCGAGGTGGAACTGGCGGTGCAGGCGGCGCTGACCGACCTGGTGGCCGAGGGGTTCGATGCCGGCATCCGGCTGGGCGAATCGCTGGCCGATGGCATGGTGGCGGTGCCGCTGGGCCCGCCGCAGCGCCTGGTGGTCGTGGCCGCGCCGGACTACCTGCGCCGGCACCGGCCACCGGAAACGCCGCAGGCGCTGGCCGCGCACGCCTGCATCCGCTACCGGCGCAGCGATGGCCGGCTGATGCCGTGGGAATTCACCCGCGACGGGCACGATTTCAGCATCGAGGTCGGTGGCGGGCCGATCTTCAACGACAGCGGGCTGGGCCGGCGCATGGCCATCGCCGGCCTCGGGCTGGCGCAGGTGTTCGAGGCGGCGGCGGCCGAGGACCTGGCCGCCGGCCGCCTGCTGCGCCTGCTCGACGCGTGGCAGCCGCCGTTCCCCGGCTTCCACCTGTACTACCCGTCGCGCGAGCAGCTCGCGCCCAAGCTGCGGGTGTTCGTCGATTTCATGCGCGACGCCAACGCGGTGTCGTCGTAG
PROTEIN sequence
Length: 307
MKQDFTIDPSLLPALAAFACVARHASFSRAAIELGMSASAASQSVRTLERRLGVRLLHRTTRRVGLTEPGERLLREAAPALARIGGALQALEESRDVPAGRLRITAPRIVVEQMLLPHLPAFSARFPHVEVELAVQAALTDLVAEGFDAGIRLGESLADGMVAVPLGPPQRLVVVAAPDYLRRHRPPETPQALAAHACIRYRRSDGRLMPWEFTRDGHDFSIEVGGGPIFNDSGLGRRMAIAGLGLAQVFEAAAAEDLAAGRLLRLLDAWQPPFPGFHLYYPSREQLAPKLRVFVDFMRDANAVSS*