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scnpilot_solids1_trim150_scaffold_4559_1

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 944..3397

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 832.0
  • Bit_score: 1307
  • Evalue 0.0
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 825.0
  • Bit_score: 1305
  • Evalue 0.0
  • rbh
Ribonuclease R n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G290_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 825.0
  • Bit_score: 1306
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2454
ATGAAAAACAAAAAGACCCCCGGGGCCGGCAAGGCCCCCAAGTCCGCCCCCGGCGCAAAGCCGGGCACGCCCCGCAAGTCGGCCAAGCTGCCGCCGTGGATGCCGGAGAGCCTGGCCACGCCCGCCAAGGGCGGCCGCGGCAAATCCCGCGACAGCGCGCCACCGAAGAGTTTCGTGCGTGGCCGCTCGCGGCCGGCGCCGGCCGCGGTCCTCGACGACCCCTATGCCGCGCGCGAAGCCGAGCGCTACGCCCAGCCCATTGCCAGCCGCGAGGCGATCCTGCAGCTGCTGGACCGCTGCGACGGGCCGCAGAACGCCGAGGAGATCGGCGCGCGGCTCGGCCTGACCGAACCGGAGCGCGCCGACGCGCTGGCCAAGCGCCTGGGTGCGATGGTGCGCGACGGGCAGCTGGTGCAGAACCGCCGCGGTGGCTTCGCCCCGGTGCTGGTCACCAACCTGATTCCCGGCGTGGTCATCGCCAACCCGGAAGGGTTCGGCTTCCTGCGCCCGGACGAGGGCGGCGACGACCTGTTCCTGCCGCCGTACGAGATGCGCAAGGTCATGCATGGCGACCGCGCGCTGGCCAATGTCACCGGCATCGACCGCCGCGGCCGCCGCGAAGGCAGCATCGCGCGCGTGCTCGAGCGTGGCGTCAACCGCCTGATCGGCAACTTCAGCGTCGAGATGGGCATCAACTACGTGGTGCCCGACGACAAGCGCATCCAGCGCAGCATCCAGATCCCGGCCGACGCCACCGGCGGTGCGAAGGACGGCCAGTTGGTGGTGTGCGAACTGACCCAGGCGCCGGATACGCGGCGCCCGCCGATCGGCAGGGTCATCGCCGTGCTCGGCGACAAGCTGACCCCGTCGCTGGTGGTGGAAACCGCCATCCACGGCCACGATTTGCCGCATGAGTTCCCGCCGGAGGTGCTGGACGAGGCGACGGCGATCCCGATGACGGTGGACCCGACGATGATCGGCACCCGCGTGGACCTGCGCGCGCTGCCGCTGGTGACCATCGACGGCGAGGACGCCAAGGACTTCGACGACGCGGTGTTCTGCGAGCCGAACCGGGACGGCTTCCGGCTGGTGGTGGCCATTGCCGACGTCTCGCACTACGTGCGTCCGGGCACGCCGCTGGACGATGAGGCGTTCAGGCGCGCCACCTCGGTGTACTTCCCCGGCTACGTGGTGCCGATGCTGCCGGAGACGCTGTCCAACGGCATCTGCTCGCTGCGGCCGAAGGAAGACCGCATGTGCTTCGTCTGCGACATGCAGGTGGACCGCAAGGGCGAGGTGGTGCAGTCGCGCTTCTACGAGGCGGTGATGAACTCGCATGCGCGCCTGACCTACACCCAGGTGTGGAACGCGGTGGGCGAGGACGACGCCGACGCCAAGGCCTTCATCGGCCCGCTGCTGCCGCAGATCCAGAGCCTGCACCAGCTGTACCGCATCCTGGCCAAGGCGCGCGAACGCCGTGGCGCGATCGAGTTCGAGTCCTCGGAAGTGCGCTTCGTGCTGGACAACCGCGGCGAGGTCACCCAGGCCGGCATGCTGGTGCGCAACGACGCGCACAAGCTGATCGAGGAGTGCATGATCGCGGCCAACGTCGAGGCCGCGCGCTACCTGCTGGCGACCCACATCCCGGCGCCGTTCCGGGTGCACGAGCGGCCGCCGGAATCCAAGTTCGCCGACCTGCTGGAGTTCCTCAAGGAATTCAAGCTGAGCCTGCCGGCGTGGAGCAAGGTGCAGCCGGGCGACTACACCCGGCTGCTGAAGAAGGTACGCGAGCGCCCGGACGCGGCGCTGCTGGAGTCGGTGCTGCTGCGCAGCCAGTCGCTGGCGGTGTACTCGCCGGACAACAACGGCCACTTCGGCCTGGCGCTGGAGGCCTACGCGCACTTCACCTCGCCGATCCGGCGCTATCCGGACCTGCTGGTGCACCGTGCCATCAAGTACGCGCTCACCGGCGGCCCGCGCGACAAGTACACCTACACGCCGCGCGAGATGGCGGCGCTGGCGCTGCAGTGCTCCGAGCGCGAGCGCCGTGCCGACGAAGCCGAGCGCGAGGTGGACGAGCGGTTCCGCGCGGCCTGGATGGAGAAGCACGTCGGCGGCCAGTTCGATGGCGTCATCAGCGGCGTGACCAGCTTCGGGCTGTTCGTGGAGCTGGACGAATCCAAGGTCAACGGGCTGGTGCACGTCACCCAGCTGCCGCACGACTACTACCAGTTCGACCCGATGCGCAAGACGCTTACCGGCGACCGCCGCGGCAACCAGTTCCGGCTGGGCGACCGGGTGCGCATCCTGGTGCTCAAGGCCAGCATGGAGGACCGCAAGATCGACTTCCGCCTGGTCGAGCGGCTCGATGGCGACGCCAGCGCGGCGGACCAGGGCCTGCCACCGCTGCCGCCGCGCGGCAAGCCGGCCAAGCGCGCCAAGCAGAAGTACTGA
PROTEIN sequence
Length: 818
MKNKKTPGAGKAPKSAPGAKPGTPRKSAKLPPWMPESLATPAKGGRGKSRDSAPPKSFVRGRSRPAPAAVLDDPYAAREAERYAQPIASREAILQLLDRCDGPQNAEEIGARLGLTEPERADALAKRLGAMVRDGQLVQNRRGGFAPVLVTNLIPGVVIANPEGFGFLRPDEGGDDLFLPPYEMRKVMHGDRALANVTGIDRRGRREGSIARVLERGVNRLIGNFSVEMGINYVVPDDKRIQRSIQIPADATGGAKDGQLVVCELTQAPDTRRPPIGRVIAVLGDKLTPSLVVETAIHGHDLPHEFPPEVLDEATAIPMTVDPTMIGTRVDLRALPLVTIDGEDAKDFDDAVFCEPNRDGFRLVVAIADVSHYVRPGTPLDDEAFRRATSVYFPGYVVPMLPETLSNGICSLRPKEDRMCFVCDMQVDRKGEVVQSRFYEAVMNSHARLTYTQVWNAVGEDDADAKAFIGPLLPQIQSLHQLYRILAKARERRGAIEFESSEVRFVLDNRGEVTQAGMLVRNDAHKLIEECMIAANVEAARYLLATHIPAPFRVHERPPESKFADLLEFLKEFKLSLPAWSKVQPGDYTRLLKKVRERPDAALLESVLLRSQSLAVYSPDNNGHFGLALEAYAHFTSPIRRYPDLLVHRAIKYALTGGPRDKYTYTPREMAALALQCSERERRADEAEREVDERFRAAWMEKHVGGQFDGVISGVTSFGLFVELDESKVNGLVHVTQLPHDYYQFDPMRKTLTGDRRGNQFRLGDRVRILVLKASMEDRKIDFRLVERLDGDASAADQGLPPLPPRGKPAKRAKQKY*