ggKbase home page

scnpilot_solids1_trim150_scaffold_99_35

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(37415..40741)

Top 3 Functional Annotations

Value Algorithm Source
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKN0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 999.99
  • Bit_score: 1777
  • Evalue 0.0
RND transporter {ECO:0000313|EMBL:KIO48129.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 999.99
  • Bit_score: 1784
  • Evalue 0.0
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 999.99
  • Bit_score: 1461
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3327
ATGAACCAGATCGTACTTATCGCATTACGGAGACCTTACACCTTCGTGGTTCTTTCCATTATGATCGTCATATTTGGAATCAGGGCCATACGGCACTCGCCGACGGACGTCTTTCCCGCCATCAAGATTCCCGTGATCTCCGTAGTCTGGGCTTACGCCGGCATGCTGCCGCTGGACGTGTCCGGTCGTATCACTTTTTACTTCGAGCGTGCATTGACCTCGACGGTGGAAGGTATCTCGGATATCGTCAGTCAATCGTACTATGGCATCAGCATCACGAATATTTTTCTTCAGCCCCAAACCAACCTCCCTGGCGCAGAAGCGGAAGTCGCAGCGATAAGCCAGACGATCGTCAAGGCATTGCCACCGGATATTTCCCCGCCGATGATCATGCGCCTGGAAGCCTCTTCTGTACCGGTTGTCATGCTGCAGCTTACTTCGGAAGAGATGACCCCGGCACAACTCTATAATCTTGCTTTTACGCAACTCAGACCCCTGCTTGTCGTGATCCCCGGGGCGATCGTTCCGCATCCTTACGGCGGAAAGCCCATGCAGCTTCTGGTATCCCTCGATAGAAACAGAATGCTGGCTCACGATGTGTCGCCAACCGATGTCCATGCGGCTTTCGATCGACAGAATATCGTGCTGCCCGCGGGTGACATGAAGATCAAGCAGACCGACTGGATGGTCGAGACAAACGCGATGCCGCCGAAGATCGAGGATTTCAATCGTATCCCGATAAAGAAGAAAAAAAATTCGTTCATTTTCCTGCGTGACGTCGCCGACGTTCAGCTGGCAGGGCCGCCGCAAACAAACTCCGTCATCGTGGATGGGAAGCAGGCTGTCGTCATGGTCGTCATGAAAAGCGGTGATGCGTCGACCCTGGATGTAGTCGACGGCGTCAAGGCAGCCATTCCACTTATCAAGGAGATAGTCCCGTCCAGTGTGGACGTTAAGATCATCACCGACGCATCGGTCTTCGTGCGGGAATCCATCAACGAGGTGATGCATGAGATGATGATCGCCGCTCTGCTTGTCGGTTTCATCGTCATGCTCTTGCTCGGCTCATGGCGTCCCATGATAGTCGTTACGATTTCAATTCCGTTGTGTATCTTAACCTCCGTCATCTGCCTGCAGGCGCTGGGCGAATCGATGAACGTCATGACGCTGGGGGGACTGGCGCTGGCGGTAGGAATTCTTGTCGATGATGCGACAGTGATGATCGAGAACATCGATACTCACCTGGAGATGGGCAAGGAACTCGATAAAGCCATCATCGATGCGGCAAATCAGATCATTATCCCGACGCTGCTCGCCACATTATGCATATCCGTTGCCTGGCTCCCGCTGTTCACGCTTTCCGGCGTATCGGGCTATCTCTTCAGGCCGATGGCACTGGCGGTGATATTCGCCATGCTGGCGTCCTTCATCCTGTCGCGCACGCTCGTGCCGACCCTGGCGAAATATCTTATCAAGCCTCCTCACGGGGAAGAACATGGAAAGGAAGGCCACCATGGTGATGAAAAACAAGGTCATCATGGCGAGGAAAAGCCAGCAGGGAAGCTTGCCCGTTTTTGGCAGAAGTTAAAGCGTCATTTGGCGATTTTCTCCCGTTTTGGGCAGAAATTAAAGCATCATTTAGAGATTTTCTCCCGTTTTCAGGAAGGATTCGAGAGCCGCTTTACCCATTTCAGTGCCAGGTATGGCAATCTGCTCGAACGAACGATTGAAAATCGCCGCATGTTCGCAACGGTCATGCTCACCTTCGCACTCGCCTCTCTTGTTCTGTTCTACTTCAACGGCCGCGATTTCTTTCCGGAGGTCAAATCAGGCGCCATTCAGATGCACATGCGGGCGCCTCTTGGCACACGTATGGAAGCCACAAACCGCATCACCACGCTCGTTGCGGAAGATATCAGACGGATGCTTCCCGGACAGGTTGAAGACATCGTCAGCAATTGCGGCATACCTGTCGGACCGCATAATCTGGCGTTTATTCCGACCCCCACGATCGGATCTCAGGACTGCGATCTGACGATCACCCTGTTCAACGGAAAATCAGCCGTGTGGGATATTCGGAAAATTCTCCACGAGGGCCTGAAAGAGCGCTATCCGGGGACTGAATTCACCTTTCAGCCAGCCGATCTGATCGCGAAAATTCTGAATTTCGGCTCCCCTTCTCCGATTGATGTTCAGGTTAACGGGATGGATCTATACGGAAACTATGCATTCGCGCGTCAACTGGCCAATAAGCTACGCACAATTCCCGGTTCCTCCGATGTGGTGATCCAGCAAACCATGCGCACGCCAACCCTGCTTGTTGAAGGTCAAAGAACATTTGGATTCAGTGTTGACAGGAGCGAAGAGGATATCGCCCTGAACATGCTGGTGACGACTAGCGGCAGTCAGCAGATCGACCAGAAATACTGGCTCGATACAAAGACCGGCATGTCATACCAGATCAATATATATGATCCTCAACCTGAAGTCGCAAGTATCAATGACTTGAACGAGGTTCCTGTCAAGCCGGTGGGGGAAGATGGCCTGTATGAGGATTATCAGCTCCTCGGCAATGTGGCGGAGGAATCGCCGGTAGGCACGCCGGGCCTGGTCACCCACAGGGGTGTCAGGCCGCTGGTTGAAGTCTATGTATCCGCCGAAGGGCGGGGGCTGGGCGGCGTGCTGAAGGACGTCCAGAAAATTGTCGACGAGATGAAAGATAAACTTCCTCGCGGCTCCACTATTAAAATCGCCGGCCAGGCCGAGACTATGGTCGCTACCTATCGCGAGCTGATTATCGGCCTCGTACTGGCTGTCGTGCTGATCTATCTCCTGCTTGTCATCAATTTTCAATCATGGCTGATTCCCTTCATCATCATCACAGCCCTGCCCGGCGCCCTGGCAGGCATCGCCTGGGCCCTGTTCCTGACCCAAACGAATATTTCCGTTCCGGCCCTGACAGGCACCATCATGGCCATGGGAACGGCCACGGCAAATTCCATACTTGTCGTGTCCTATGCGCTGGAGCGCATCGCAGAGCATGGCGACACGCTGCAAGCCGCTATCGAGGCCGGCAAAGCCCGTATTCGTCCTGTTCTCATGACCGCATCGGCCATGATCATGGGCATGCTTCCGATGGCGATGGGAGGGTCCACCAATGCGCCGCTGGGCCGTGCGGTCATCGGCGGCTTGACGTTTGCAACGATATATACCCTGTTTTTTGTCCCCTGCATGTATGCCATCATGTATCACAAACGAGGCGTTCCTAAAGACAAGGAAAGCATTCCTAAAGACAAGAAAAGCGTTCCTCAACCGGAAAATTCCTGA
PROTEIN sequence
Length: 1109
MNQIVLIALRRPYTFVVLSIMIVIFGIRAIRHSPTDVFPAIKIPVISVVWAYAGMLPLDVSGRITFYFERALTSTVEGISDIVSQSYYGISITNIFLQPQTNLPGAEAEVAAISQTIVKALPPDISPPMIMRLEASSVPVVMLQLTSEEMTPAQLYNLAFTQLRPLLVVIPGAIVPHPYGGKPMQLLVSLDRNRMLAHDVSPTDVHAAFDRQNIVLPAGDMKIKQTDWMVETNAMPPKIEDFNRIPIKKKKNSFIFLRDVADVQLAGPPQTNSVIVDGKQAVVMVVMKSGDASTLDVVDGVKAAIPLIKEIVPSSVDVKIITDASVFVRESINEVMHEMMIAALLVGFIVMLLLGSWRPMIVVTISIPLCILTSVICLQALGESMNVMTLGGLALAVGILVDDATVMIENIDTHLEMGKELDKAIIDAANQIIIPTLLATLCISVAWLPLFTLSGVSGYLFRPMALAVIFAMLASFILSRTLVPTLAKYLIKPPHGEEHGKEGHHGDEKQGHHGEEKPAGKLARFWQKLKRHLAIFSRFGQKLKHHLEIFSRFQEGFESRFTHFSARYGNLLERTIENRRMFATVMLTFALASLVLFYFNGRDFFPEVKSGAIQMHMRAPLGTRMEATNRITTLVAEDIRRMLPGQVEDIVSNCGIPVGPHNLAFIPTPTIGSQDCDLTITLFNGKSAVWDIRKILHEGLKERYPGTEFTFQPADLIAKILNFGSPSPIDVQVNGMDLYGNYAFARQLANKLRTIPGSSDVVIQQTMRTPTLLVEGQRTFGFSVDRSEEDIALNMLVTTSGSQQIDQKYWLDTKTGMSYQINIYDPQPEVASINDLNEVPVKPVGEDGLYEDYQLLGNVAEESPVGTPGLVTHRGVRPLVEVYVSAEGRGLGGVLKDVQKIVDEMKDKLPRGSTIKIAGQAETMVATYRELIIGLVLAVVLIYLLLVINFQSWLIPFIIITALPGALAGIAWALFLTQTNISVPALTGTIMAMGTATANSILVVSYALERIAEHGDTLQAAIEAGKARIRPVLMTASAMIMGMLPMAMGGSTNAPLGRAVIGGLTFATIYTLFFVPCMYAIMYHKRGVPKDKESIPKDKKSVPQPENS*