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scnpilot_solids1_trim150_scaffold_968_7

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(5167..5793)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS4_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 208.0
  • Bit_score: 416
  • Evalue 2.00e-113
  • rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 208.0
  • Bit_score: 416
  • Evalue 6.40e-114
  • rbh
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 208.0
  • Bit_score: 416
  • Evalue 2.80e-113

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCAAGAAATCTTGATCCCAAATGCCGTCAATGCCGACGTGAGGGTGAGAAGCTGTTCCTTAAAGGTGAAAAATGTTTTACCGATAAGTGCGCCATCGAGCGCCGGAATTATGCACCCGGACAGCATGGCCAGAAAAGCGGTCGTCTATCGGACTACGGCGTGCAACTACGCGAAAAGCAGAAGCTGCGCCGGATATATGGGGTGCTGGAGCGTCAATTCCGTAATAGTTACGAGCTTGCGGAGAGGCAGCGCGGCGTTACCGGTGAAAATCTTCTTCAATTACTGGAATGCCGGCTTGACACGGTTTCCTATCGCATGGGGTTTGGTGCATCGCGATCCGAGGCACGTCAGATTGTCCGTCATAACGGGATCCTGGTAAATGGCAGGAGAATCAATATTCCTTCTTATCAGGTGAAGCCGGGGGATGTCATAGAGGTTACAGAGAAGGCAAAGAACCATTTGCGCATCAAGGCATCCGTGGAAGCTGCCGATCAGCGGCACTTTCCGGAATGGCTGGAGGTGGACACTAAAGCCATGAAGGGAACTTTCAAGAACAAACCCGAGAGATCCGATTTACCGTCAAGCATTAATGAATCTCTCGTAATTGAATTGTATTCCAAGTAA
PROTEIN sequence
Length: 209
VARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRNYAPGQHGQKSGRLSDYGVQLREKQKLRRIYGVLERQFRNSYELAERQRGVTGENLLQLLECRLDTVSYRMGFGASRSEARQIVRHNGILVNGRRINIPSYQVKPGDVIEVTEKAKNHLRIKASVEAADQRHFPEWLEVDTKAMKGTFKNKPERSDLPSSINESLVIELYSK*