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scnpilot_solids1_trim150_scaffold_3554_6

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: 6266..7072

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM67 RepID=J3GZ43_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 225.0
  • Bit_score: 189
  • Evalue 4.00e-45
Transcriptional regulator {ECO:0000313|EMBL:EJM79540.1}; TaxID=1144335 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM67.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 225.0
  • Bit_score: 189
  • Evalue 5.60e-45
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 244.0
  • Bit_score: 176
  • Evalue 8.40e-42

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Taxonomy

Pseudomonas sp. GM67 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGTCAGGAGAGAGGGCCAAGTTGTCAACCTCGCAGGGATTCGTGAAGGACAACGGAGATAGCGACACCAAAGTTGGTGTGGCCGCAGTTGACCGTGCATTGTCGATTCTGGCGGCCTTTGACGACGGGACGCAGCAGTTGGATCTGGCCGAGCTCGCGCGCCGCACTGGGCTTTACAAGAGCACTCTGCTGCGCCTGGCTGCCTCACTTGAGAACGGTGGAGTGCTTCGGCGAGGAGCAGACGGCGCGTTCCGCCTGGGGCCAACGCTGTTCCGATTAGGGACTCTTTACCGCGACTCGTTTGACCTGCGAGACCTGGCCATGCCTGTCATGCAGCACTTGGCCGACGTCACCGGCGAGAGCGTCTCGTTCTATGCCCGCGAGGGCGACAAGCGCATCTGCCTCTTCCGCGTCCACGCAACTCAGCACCGCATACTCCACTACCTGCGTCCGGGCACCGTGTTTCCTGCGAACACGGGCGCTGCTGGCAAGGTCCTAACGGCCTGGTCTGAACCCTTTGCAGAGAAGGCAGCCGCCATGCGCGACCAAGTCTTGATGCTCTCGATCGCTGGCAGAACGATCGCCGATACCAACGCGATGTCGGTTCCCGTACTTGACGCAGAAGGCGGCCTGGTTGGCGCAATGAGCCTCGCAGGACCGGCACTGCGCTTCGGCGAGGCGGAGCGCCCGGTTCTCGCTGCGGCCCTACTCGAGGCCGGAGCGGAACTTACGCGCCTACTTGGTGGAGACCCCACTCCGCACGCGTACAGGTTGGCCAACCTTGACGAAGTGCTGGGGCGCCCCTGA
PROTEIN sequence
Length: 269
MSGERAKLSTSQGFVKDNGDSDTKVGVAAVDRALSILAAFDDGTQQLDLAELARRTGLYKSTLLRLAASLENGGVLRRGADGAFRLGPTLFRLGTLYRDSFDLRDLAMPVMQHLADVTGESVSFYAREGDKRICLFRVHATQHRILHYLRPGTVFPANTGAAGKVLTAWSEPFAEKAAAMRDQVLMLSIAGRTIADTNAMSVPVLDAEGGLVGAMSLAGPALRFGEAERPVLAAALLEAGAELTRLLGGDPTPHAYRLANLDEVLGRP*