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scnpilot_solids1_trim150_scaffold_6396_3

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: 1635..2441

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 272.0
  • Bit_score: 191
  • Evalue 3.30e-46
Shikimate dehydrogenase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=AROE_MOOTA similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 272.0
  • Bit_score: 191
  • Evalue 1.00e-45
Shikimate dehydrogenase {ECO:0000313|EMBL:AIZ46738.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 268.0
  • Bit_score: 196
  • Evalue 4.60e-47

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Taxonomy

Deinococcus swuensis → Deinococcus → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 807
ATGCACAATGCGGCCTTCGCTGCCGTCGGTATCGCCGCCACCTACACTGCCCGCGACGTGGCGCCCGCCGCGCTGGCGGCGGCCGCCGCCGACCTAAGGCGCGACGGCGTGCTTGGCGCCAACGTTTCGGTTCCGCACAAGCAGGCCATCACGAAGCTAGTCGATCGCATGACGCCGGAGGCGACCGCGCTTGGCGCCGTCAACACGGTCGTCAACGAGGGAGGCCAGCTCGTAGGGAGCAACACCGACGGCGCGGGCTTCGTCTCGGGGCTCCTGGAACTAGCCCCGGAGTTCCGGAGCGGGGGCTTCAGGACCCTGGTGCTCGGCGCGGGCGGCGCCGCGCGGGCGGTGGTGTGGGCGCTCGTGGCGCTTGGCGGCGACGTCGTTATCGTCAACCGCGACGAGTCCCGCGCTGCTGACCTGCTCGCCGGTCTGGTCGCGGCGGGTTTGCCTAGCGGCAAGGCCAAGGTCGGCGCGCTCGATGATGTCGAGCCCGACTTGGTGGTCAACAGCACGAGCGTCGGCATGGAAGGCGGCAAGGCGCCCGCGGATCTGCCCCTCTTGACGCGCGCGCACCTCGAGCGCTTCGCCCCGAGCGTCGTGGTGTCTGACCTCGTCTATCGCCCGGCTGTCACGCCGCTGCTGGCAGCCGCCGCCGCCCTCGGGCTCAGGCACCAGAACGGTGTTGCCATGCTCGTGGGGCAGGGAGCGCTCGCGTTCCAGGCGTGGACGAACGTGACGGCACCCGTTGGCGTCATGCGCAGCGCCGTAGAAGAGGCGCTGGCGGCCGATCTCCACCGCGCTTAG
PROTEIN sequence
Length: 269
MHNAAFAAVGIAATYTARDVAPAALAAAAADLRRDGVLGANVSVPHKQAITKLVDRMTPEATALGAVNTVVNEGGQLVGSNTDGAGFVSGLLELAPEFRSGGFRTLVLGAGGAARAVVWALVALGGDVVIVNRDESRAADLLAGLVAAGLPSGKAKVGALDDVEPDLVVNSTSVGMEGGKAPADLPLLTRAHLERFAPSVVVSDLVYRPAVTPLLAAAAALGLRHQNGVAMLVGQGALAFQAWTNVTAPVGVMRSAVEEALAADLHRA*