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scnpilot_solids1_trim150_scaffold_8729_2

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: 1902..3572

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 561.0
  • Bit_score: 747
  • Evalue 1.10e-212
Transcription termination factor Rho n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSK5_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 561.0
  • Bit_score: 747
  • Evalue 7.80e-213
  • rbh
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 561.0
  • Bit_score: 747
  • Evalue 2.50e-213
  • rbh

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1671
ATGAGCCCAAATAGTGATGAAGTACTGGTCGCCACGGCCGATGCAGGCGAGAGCGTAGAAGTGCAAGCGCCACGCAAGCGTGGCCGCCCGCGTAAGAACCCGGAAGCGGCCCCGGCCGCCCCCAAGGCCGCCAAGACGCCCAAGGCCGCAGCGACCAAAGTAGCGGCAGAGGCGCCTGCGCCAGTAGAAGTAGTACAAGAAGAAGTTCAGGAGGAGCGCCAGCGCGCCCCTCGCGGAACGAAGCCGCGTTCAGGCGAAGAGGAAGACGCCCGCACTACCTCCCAGCAAACGAGCGACGCGTATGGCGCGCAAGACGACGGCGACGACAGCGCCTCTGGGGAAGACAACGCGGACGACGGTAAGGACCAAGGCGGCCGCGGCCGCGGAGGCCGCAACCGGCGCAACCGCACGCCGCGCAAGCCGGGTTACAACTTCCGCGAGCTGCATTCGAAGATCCTCCCGGAGCTTCACCTCCTCGCCAAGGAAGTCCAGCTGGAAGACTACAGGCAGATGAGCAAGGAAGACCTCGTGGTGGCCATCTTGGAGCGCTCCGCAGAGGGCGAAGGCCTGCGCCTCGTGCGCGGCTACCTCGAGATCTCCTCCGACGGGTACGGCTTCCTGCAGGAGTCGCTGCTGCAGAACAACACCCGCAGCGTCATCGTCTCTGCTGGCCTCATCAAGCAGTTCCGCTTGCGCACGGGCGACCTCATCCTGGGTAAAGCGCGTCGTCCACGGGACAACGAGCGTTACGGCACCCTGATCCGCGTGGAGGCCGTCAACAACGTCGATCCGTTCCAGTCCTCCAAGCGCCCGCGTTTCGAGGAGCTGACCCCGACCTTCCCTGAGGCCCGCATCAAGCTCGAGACCGTCGGCAACGAGCTGTCCACCCGCGTCATCGACTTACTGGCGCCCATCGGCCGTGGCCAGCGCGGGCTCATCGTCGCTCCGCCGAAGGCGGGGAAGACGACGCTCCTCAAGAAGATCGCGAACGCCGTCGTGGCGAACGAACCCGATATCAAGGTCATCGTGCTCCTGGTAGACGAGCGGCCTGAGGAAGTCACTGACTTCCGCGAGTCCGTGCACGGCGTCGAAGTCATAGCCAGCACTTTCGACGAGCCACCTTCCAACCACATCCGCGTTGCAGAGTTCGTGCACGAGCGCGCAAGGCGGATCGTCGAGGACGGCGGCCACGCCATGATCCTCCTCGACTCCATCACGCGTCTGGCGCGCGCCAACAACCTCGTCACGCCTGCAACGGGGCGCACGCTCTCTGGCGGCCTTGACTCCAACCTGCACTGGCCGAAGCGCTTCCTCGGGGCCGCGCGCAACATCCGCGGTGGCGGTTCGCTCAGCATCCTGGCGACCGCCCTCGTCGAGACCGGCTCGCGCATGGACGACGTCATCTTCGAAGAGTTCAAGGGCACAGGCAATATGGAACTGCACCTGAGCCGGCACCTCGAAGAGCGCCGCATCTTCCCAGCCATCGACATCCTCAAGTCGGGCACGCGCCGCGAGGACCTGCTGCTTGGAGAGGACGTACTCGCCAAGATGTGGCTCCTGCGCAAGGTGATCTCCGACATGGACCCAGCAGAGGCGATGGAGATGCTCCTTGGCAGGCTCGGGCGCAGCAAGAGCAACGCAGAGTTCCTCGCCACTCTCACTCAAGGCTGA
PROTEIN sequence
Length: 557
MSPNSDEVLVATADAGESVEVQAPRKRGRPRKNPEAAPAAPKAAKTPKAAATKVAAEAPAPVEVVQEEVQEERQRAPRGTKPRSGEEEDARTTSQQTSDAYGAQDDGDDSASGEDNADDGKDQGGRGRGGRNRRNRTPRKPGYNFRELHSKILPELHLLAKEVQLEDYRQMSKEDLVVAILERSAEGEGLRLVRGYLEISSDGYGFLQESLLQNNTRSVIVSAGLIKQFRLRTGDLILGKARRPRDNERYGTLIRVEAVNNVDPFQSSKRPRFEELTPTFPEARIKLETVGNELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTLLKKIANAVVANEPDIKVIVLLVDERPEEVTDFRESVHGVEVIASTFDEPPSNHIRVAEFVHERARRIVEDGGHAMILLDSITRLARANNLVTPATGRTLSGGLDSNLHWPKRFLGAARNIRGGGSLSILATALVETGSRMDDVIFEEFKGTGNMELHLSRHLEERRIFPAIDILKSGTRREDLLLGEDVLAKMWLLRKVISDMDPAEAMEMLLGRLGRSKSNAEFLATLTQG*