ggKbase home page

scnpilot_solids1_trim150_scaffold_11001_6

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: comp(4356..4661)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 101.0
  • Bit_score: 109
  • Evalue 8.10e-22
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (s similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 101.0
  • Bit_score: 109
  • Evalue 3.60e-21
DNA-directed RNA polymerase subunit omega n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRH3_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 101.0
  • Bit_score: 109
  • Evalue 2.60e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCTCAAGAAGGCTACGACAAACTGATCTCACTTACTGACTCGCGTTACCGCTTGTCCATGGTGGTGGCGCTTCGCGCCGCGCAGCTCAAGATGGGTATCCCAACCGTGCTCGAGCCAGGCGTGCTGCCTAGCCTTGAGAACAGCGTTACCGTCGCCATGAAGGAGTTCGAGGCCGGTGCGGGCTTGGCGTGGGGCGATGACCTCCCGACTAACGATGAACTCAAGCGCCTTGTCGAGGTGCGTAAGCCTGAACCAGTGAACCCGTTGGTGGGCACGCCGTTCGACGAAGACGACGACGACTGA
PROTEIN sequence
Length: 102
MAQEGYDKLISLTDSRYRLSMVVALRAAQLKMGIPTVLEPGVLPSLENSVTVAMKEFEAGAGLAWGDDLPTNDELKRLVEVRKPEPVNPLVGTPFDEDDDD*