ggKbase home page

scnpilot_solids1_trim150_scaffold_52415_3

Organism: SCNPILOT_SOLID_1_TRIM150_Truepera_66_100

near complete RP 48 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: comp(1226..1591)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JZR4_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 121.0
  • Bit_score: 139
  • Evalue 2.10e-30
tRNA(FMet)-specific endonuclease VapC {ECO:0000313|EMBL:KJL22547.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 119.0
  • Bit_score: 138
  • Evalue 8.70e-30
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 119.0
  • Bit_score: 133
  • Evalue 4.80e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAAGGTACTGGACGCCTCGGCGCTGCTGGCCTTCTTGCAAGGCGAGGCCGGAAGCCGCGTCGTGGCTGAGGCGCTGGAGTCTGGAGCGAACTGCGCGGCGGTGAACTGGTCCGAAGTCGCCCAAAAGGTCCGAGCGAGCGGCCGCAACTGGGACCTGAGCCGGGCGCTGTTGCTCTCGTACGACCTACGTATCGAGCCGGTTACCGCGGAAGACGCGGAACGCGCGGCCAGGTCCTGGCGGGCAGGCTCGGGCATGTCGTTGGCCGACAGGCTCTGCCTGGCGTTGGCACACCGGCTCGGGGCACCGGCACTTACTGCGGACGGCCACTGGGGAGCGGCCCCGCCAGTCGTACAGATTCGGTGA
PROTEIN sequence
Length: 122
MKVLDASALLAFLQGEAGSRVVAEALESGANCAAVNWSEVAQKVRASGRNWDLSRALLLSYDLRIEPVTAEDAERAARSWRAGSGMSLADRLCLALAHRLGAPALTADGHWGAAPPVVQIR*