ggKbase home page

scnpilot_solids1_trim150_scaffold_2070_12

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 10810..12117

Top 3 Functional Annotations

Value Algorithm Source
Short-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KJE75439.1}; EC=6.2.1.- {ECO:0000313|EMBL:KJE75439.1};; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 431.0
  • Bit_score: 421
  • Evalue 1.40e-114
cyclohexanecarboxylate-CoA ligase; K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 399.0
  • Bit_score: 299
  • Evalue 1.80e-78
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU02_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 399.0
  • Bit_score: 299
  • Evalue 5.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ferrimicrobium acidiphilum → Ferrimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGATGCCGTGAACTCCGCGCACGCGCTTCGGGAAATCGCCATGTCAACTCACAGTGTCAACATACCGCCCATCTCCGCTTCGGCTCGCGATATGCTGGACCGTTTCGCGCTGCCCATTCCCGAGGAGCGCAGGCGGCTCTATTACGAAAATGGCTGGTGGCGACGCCAGACCATCGTCGATGATTTCCTCAGGGTATGTCGCGATGATCCGGGTAAAACGGCTGTCGTCAGCTATCGGTACGACTCGGACCAGGCTCATTACCTGACGTACGCCAGCCTGGCCACCTACGTCGAAAGAACCGCCGCCGCGCTGCTTCATCTTGGCGTCGGTTGCGGCGACGTCGTTTCCGTGCAGTTGCCCAACCGCTGGCAGTTCAATGTTGCCGCGCTCGCCATCCACCGGATCGGCGCCATTCTCAATCCGGTCATACCCATTCATCGCGAGCGCGAAGTCGGCTATATCACTGCGCTGCTCAAGTCCAAGGTCTTCATCACCATTGGCATGCATCGGGGCTTTGATTACCCGCGCATGCTGCGTGGCATATGTGCCGCGGGTTCCTCGATTCGGCACCGCATCATTTGCGAAGGAGACCCGGCGGCCGACGAGCTTTCGTTCGAGAAGGACATTCTCGGGCGGCCGTGGGAGGAGGAATATCGCGATGCGCTGGCGGCCATCAGGGTCGACCCGGACGCGATCTCGGACCTTCAGTTCACCTCCGGCACCACCGGCGAGCCCAAGGGGGTCGGGCACACCTTCAATACCCAGTATGCGCGTGCCCGCACGATCTTCGAGACGCTGAGGTTCTCGTCCGGCGACACCGTCTTCATGCCGTCGACGCTGGCCCACTCGACGGGCTACGTCTATGGCTGCATCACACCCGCCATGGTGGGCATGACGGCTGTCTACCAGGACCGGTGGGATCCAGTGCGGGCGCTGGACATCATCGCCCGGGAGAAGGCCGTCTGGTCCTTCGCCAGCCCGACATTCATGGTCGACCTGCTGCGTGCTCATCGCGAGCATCGGGTCGACCTGCCGAGCTTCAAGTACTTCATTTCCGGCGGCGCCAAGATCCCCTCGGCGCTCGTACACCAGGCAGACGAGGAATTGAGCGTGCGGCTTATTGCCGTCTGGGGCATGACCGAGAACGGCGCCGTGACGGTGACGCACCTGGACGAGCCGGTCTTGGCCGCGGCCGAAAGCGATGGCAAGCCCTGCCCCTGGATGGAGTTGCGGGTCGTCGACCCGGAGACCAAGGCCGACCTGCCTGCCGGCGTTGATGGTGAGCTCCAGGTGCGCGGGGCCAAC
PROTEIN sequence
Length: 436
MDAVNSAHALREIAMSTHSVNIPPISASARDMLDRFALPIPEERRRLYYENGWWRRQTIVDDFLRVCRDDPGKTAVVSYRYDSDQAHYLTYASLATYVERTAAALLHLGVGCGDVVSVQLPNRWQFNVAALAIHRIGAILNPVIPIHREREVGYITALLKSKVFITIGMHRGFDYPRMLRGICAAGSSIRHRIICEGDPAADELSFEKDILGRPWEEEYRDALAAIRVDPDAISDLQFTSGTTGEPKGVGHTFNTQYARARTIFETLRFSSGDTVFMPSTLAHSTGYVYGCITPAMVGMTAVYQDRWDPVRALDIIAREKAVWSFASPTFMVDLLRAHREHRVDLPSFKYFISGGAKIPSALVHQADEELSVRLIAVWGMTENGAVTVTHLDEPVLAAAESDGKPCPWMELRVVDPETKADLPAGVDGELQVRGAN