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scnpilot_solids1_trim150_scaffold_3961_2

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(393..1979)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000366F746 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 522.0
  • Bit_score: 859
  • Evalue 1.80e-246
  • rbh
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 520.0
  • Bit_score: 857
  • Evalue 1.60e-246
  • rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACS17742.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 520.0
  • Bit_score: 857
  • Evalue 7.20e-246

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
ATGACCCCTTCGATCCGACATCTGCGCCTGCTTGCCGGCGCGGCCCTGCTGGCCATGGCGGCCGCCGCTTCGGCGCAGACGGTGCGCATCGCCAATCAAGGCGATGCGCTGTCACTCGACCCGCATTCGCTCAATGAGTCGCTGCAGCTTTCGGTCGACAGCAATGCCTACGAGGCGCTGGTCGGCTGGAATCAGAAGCTTGAGATGCAGCCGATGCTGGCCACCTCGTGGAAGCAGACCTCGCCCACGGTCTGGCGCTTCGAGCTGCGCAAGGGCGTGCAGTTCCACGACGGCACGCCGTTCACCGCGGACGATGTGGTCTTCACCATGGGCCGCATCATGGCCGACGGTTCGGACATGAAGAGCTACGGCACCGACATCAAGGAAACGCGCAAGATCGACGAGCACACGGTCGAAATCGAGACCAAGGCACCGCTGCCCATCCTGCCGCGCATCCTTTCGCAGGTCTACATCATGAGCAAGAAGTGGTGCGAGGAGAACAATGCCACCAAGCCGGTGGACCGGCGCAAGGGCGTGGAGAACACGGCCTCTTTCAAGACCAATGGCACGGGGCCGTTTCATGTGCGCGAGCGCCAGCCGGGCGTGCGCACCGTGTTCGTGCGCAACCCGCGCTACTGGGGCAAGGTCGAGGGCAACGTGCAGGAGGTGATCTTCACCCCCATCGCCAACCCGGCCACCCGCGTGGCGGCGCTGCTGTCGGGCGAGGTGGACGTGATGGAGCCGGTGCCGGTGCAGGACATCGCCCGTGTCGAGTCCAACCCCGGCACGCGCGCCATCGTCGGCCCCGAGCTGCGCACCATCTTCCTGGGCATGGACCAGAAGCGTGACGAGCTGCAGTACTCGAGCGTCAAGGGCAAGAACCCGTTCAAGGACGTGCGCGTGCGCAAGGCCTTCTACCAGGCGATCGACATCGAGGGCATCAAGAAGACGGTGATGCGCGGCCAGTCGCGCCCGACCGCGCTGATGGTCGGCCCCGGCATCAACGGCTGGACCGCCGAGCAAGACAAGCGCTTGCCGTTCGACGTGGAGGCGGCCAGGAAGCTGATGGCCGAGGCAGGCTACCCGAACGGCTTCGAGGTCGCCATGAACTGTCCCAACGATCGCTACGTCAACGACGGGCAGATCTGCCAGGCGGTGGCGGCCAACCTGGCGAAGATCAACGTCAAGATCAATCTCCAGGCCGAGACCAAGGGCACCTATTTCCCGAAGATCCTGCGCCGCGACACCAGCTTCTACCTCTTGGGCTGGACGCCTTCGACGTATGACGCGCACAACGCGCTGAACGCACTGATGCGCTGCCCCGACGACAAGACCGGCGCCGGACAGTTCAACCTGGGCAGCTACTGCAATCCCAAGCTCGATGGGCTGATCGAGAAGATCGGGTCGGAGACCGACCAGGCCAAGCGCGACGCCATGATCAAGGAGGCGTTCCAGATCCACATCGACGACGTGGGCCACCTGCCGCTGCACCAGCAGACGCTGGCCTGGGGCGCCAGCAAGAAGGTGGAGTTGACGCAGCTGGCCGACAACTACATGCCCTTCAAGTGGATCAGCATCAAGAAGTGA
PROTEIN sequence
Length: 529
MTPSIRHLRLLAGAALLAMAAAASAQTVRIANQGDALSLDPHSLNESLQLSVDSNAYEALVGWNQKLEMQPMLATSWKQTSPTVWRFELRKGVQFHDGTPFTADDVVFTMGRIMADGSDMKSYGTDIKETRKIDEHTVEIETKAPLPILPRILSQVYIMSKKWCEENNATKPVDRRKGVENTASFKTNGTGPFHVRERQPGVRTVFVRNPRYWGKVEGNVQEVIFTPIANPATRVAALLSGEVDVMEPVPVQDIARVESNPGTRAIVGPELRTIFLGMDQKRDELQYSSVKGKNPFKDVRVRKAFYQAIDIEGIKKTVMRGQSRPTALMVGPGINGWTAEQDKRLPFDVEAARKLMAEAGYPNGFEVAMNCPNDRYVNDGQICQAVAANLAKINVKINLQAETKGTYFPKILRRDTSFYLLGWTPSTYDAHNALNALMRCPDDKTGAGQFNLGSYCNPKLDGLIEKIGSETDQAKRDAMIKEAFQIHIDDVGHLPLHQQTLAWGASKKVELTQLADNYMPFKWISIKK*