ggKbase home page

scnpilot_solids1_trim150_scaffold_4423_7

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(4404..5357)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4R5_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 307
  • Evalue 1.20e-80
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 307
  • Evalue 3.70e-81
  • rbh
Transcriptional regulator, LysR family-like protein {ECO:0000313|EMBL:AEG91383.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 307
  • Evalue 1.70e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGACTCCCTTGATCTCATTCAAATTTTTCGCGAGGTGGCGCGGCGCGGCAGTTTCTCGGCCACCGCTGCTGCGCAAGGCGTTTCGCCTGCGAGCGTCAGCAAGGCCATCGCACAGCTAGAAACGCGTTTCGGCCTGCGTTTGTTCCATCGAACGACGCGCAAGGTGTCGCTGACCGACGCCGGGCAGTTGCTGTTCGAACGCAGCAGCGCGCTGCTCGAACTCGTGGACCTGGCGCAGGGTGAGTTGCATGAACGCGCCACGCGGCCCAGCGGCAGATTGACGGTCACCGTGCCCTACGGTCTGGGGCACACCGACCTGCCGGCGATGCTGGGCGACTTTCTGCTGCGCTATCCGGAGGTGGATCTCGATCTGTACGTGACCGACCGGGTGGTGGGGCTGGCCGAAGAGGGCGTGGACCTGGCGTTTCGCGTCGGACCCATCGAGGACCAGAACCTGATCGTGCGCCGCCTGCTGCCCCTGGATTTCGTGGCCGTGGCCGCGCCCGCGTACTGGAAGGCGCATGGCAAGCCCGCGCATCCGCGAGAGTTGTGTACCCACGCGCAACTGGCCTGGAGCCTGCACGGGCAGGCGCCGCGCTGGCACTTCGAGGTGGCTGGCAAGCCGTTCGAATTGGCCCTGCAGCCACGGGTGAACGCAACGCTGGCGGCCCCGCTCATCACGCTGGCCACGCAGGGCCTGGGTGTGATGTGGGCACCGCGACGCGCGCTGGCGCAGTGGATCGACAGTGGCGCGCTCGAGTGCGCGCTCGAGCCGTTTTCACCGTCCAACGTGTGGCTTTATGCGGCGTACATGCAGCGGCGTCACAACAGCGCAGCGCTGCGCGTGCTGCTCACGCATCTGGATGCGTTTGCCGAGGCCTTCAAGTGCCGTGATGGGCAGCGGCCGCAGGATGCGCCACCATCATCGGGCGCCGCCGCACCGCAGTCTTGA
PROTEIN sequence
Length: 318
MDSLDLIQIFREVARRGSFSATAAAQGVSPASVSKAIAQLETRFGLRLFHRTTRKVSLTDAGQLLFERSSALLELVDLAQGELHERATRPSGRLTVTVPYGLGHTDLPAMLGDFLLRYPEVDLDLYVTDRVVGLAEEGVDLAFRVGPIEDQNLIVRRLLPLDFVAVAAPAYWKAHGKPAHPRELCTHAQLAWSLHGQAPRWHFEVAGKPFELALQPRVNATLAAPLITLATQGLGVMWAPRRALAQWIDSGALECALEPFSPSNVWLYAAYMQRRHNSAALRVLLTHLDAFAEAFKCRDGQRPQDAPPSSGAAAPQS*