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scnpilot_solids1_trim150_scaffold_8343_3

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(2259..3200)

Top 3 Functional Annotations

Value Algorithm Source
ribosome small subunit-dependent GTPase a; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 320.0
  • Bit_score: 451
  • Evalue 1.60e-124
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 320.0
  • Bit_score: 451
  • Evalue 7.00e-124
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB46_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 320.0
  • Bit_score: 451
  • Evalue 5.00e-124

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GTGACACCCACCCGCGGCCTGGTCGTGGCCGCCCATGGGCGCCACTGCGTCGTCGAAACCCCCGACGGCACGCGGCGCATCTGCCATCCGCGCGGCAAGAAGAGCCTGGCTGTCGTCGGCGACCACGTGCTCTGGCTGAGCGCGCGCCACGGCGACGGCGAAGGCACGATCGAGCAGGTGATCGAACGGCGCAATCTGCTGTACCGCCAGGACGAGGTGCGCAGCAAGTCCTTTGCCGCCAACCTGGATCAGGTGCTGATCCTGATCGCGGCCGAACCGGCGTTTTCCGAAAGTCTGCTCACGCGCGCCTTGATCGCCAGCGAGGCGGCGGGCGTCACCCCCCTCATCGCGCTCAACAAGAGCGACCTGGTCGCTCCTTTCGCCGCCGCCTGGCAACGGCTCTGGCCCTACCGACACATGGGGGGCGAGGGTCGGGACGCGCACCACTACCGCGTGCTGGCGCTCTCCCTCAGGGAATCGAAGGACGTGGACCGGGCGATGCTGCTCGGCCTGCTCGACGGCAAGACCACGCTGGTGCTGGGGCCCTCGGGCGTGGGCAAGAGCACGCTCGTGAACCTGCTGGTGCCAGGAGCCGCCGTGCTGACCGGAGAGCTCTCGCGCGCGCTGGCATCGGGCCGCCACACCACGACGACGACGACGCTGTACTGGCTCGACGACGGGCGGCGCAGCGCGCTCATCGACTCGCCCGGCTTTCAGTCCTTCGGGCTCAATCACATCGAAGCCACCGAACTGGCGCAGCTGATGCCGGACATCGCGGTACACCGGGGGAGCTGCCGTTTCTACAACTGCACGCACCTGCACGAGCCCGGCTGCGCGGTGCTGGCGCAGGTGTCAGACCGGAACGAACCCGGCGCCATCAGCACGCGACGCCACCGCATCTACCGAGAGCTGTTCGCCGAGCTGAATGCCAAGGAATATTGA
PROTEIN sequence
Length: 314
VTPTRGLVVAAHGRHCVVETPDGTRRICHPRGKKSLAVVGDHVLWLSARHGDGEGTIEQVIERRNLLYRQDEVRSKSFAANLDQVLILIAAEPAFSESLLTRALIASEAAGVTPLIALNKSDLVAPFAAAWQRLWPYRHMGGEGRDAHHYRVLALSLRESKDVDRAMLLGLLDGKTTLVLGPSGVGKSTLVNLLVPGAAVLTGELSRALASGRHTTTTTTLYWLDDGRRSALIDSPGFQSFGLNHIEATELAQLMPDIAVHRGSCRFYNCTHLHEPGCAVLAQVSDRNEPGAISTRRHRIYRELFAELNAKEY*