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scnpilot_solids1_trim150_scaffold_11510_2

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(1488..2171)

Top 3 Functional Annotations

Value Algorithm Source
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5081386 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 222.0
  • Bit_score: 378
  • Evalue 3.90e-102
  • rbh
response regulator OmpR; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 224.0
  • Bit_score: 377
  • Evalue 3.60e-102
  • rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 379
  • Evalue 3.20e-102

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGCATCCTCATTGCCGAAGACGATCAGGTTCTGGCCGATGCGCTCCTGCGCTCGCTGCGCGCGGCGGGCGCGGTCGTGGACCATGTGGCCAATGGCAGCGAGGCCGATGCCGCCTTGATGACCAACCATGAGTTCGACCTGCTCATCCTCGATCTGGGCCTGCCGCGCATGCACGGGCTGGAGGTACTCAGGCGCCTCAGAAGCCGCTCCTCGCTTCTGCCGGTGCTGATCCTCACGGCGGCCGACAGCGTCGAAGAACGGGTCAAGGGCCTGGACCTGGGCGCGGACGACTACATGGCCAAGCCCTTTTCGCTGCAGGAGATGGAGGCGCGCGTGCGTGCGCTCACGCGCCGCAGCCTGGGCACCACCACCAACGTGCTGCGCCACGGGCCGCTCACCTACGACCCGGTGGGCCGCATGGCGAGCATCGATGGCGAAGTGGTGGAACTGTCGGGGCGCGAACTCGGCCTGCTCGAAGTGCTGCTGCAGCGCGCCGGGCGCCTGGTTTCCAAGGATCAGCTCGTCGAGCACCTGTGCGAATGGGGCGAGGAGGTGAGCAACAACGCCATCGAGGTCTACGTGCACCGCCTGCGCAAGAAGATCGAGCGCGGCCCGCTGCGCATCGCCACCGTGCGCGGGCTGGGCTACTGCCTGCAGAAGATCGATTCGCCGTCGGCCTGA
PROTEIN sequence
Length: 228
MRILIAEDDQVLADALLRSLRAAGAVVDHVANGSEADAALMTNHEFDLLILDLGLPRMHGLEVLRRLRSRSSLLPVLILTAADSVEERVKGLDLGADDYMAKPFSLQEMEARVRALTRRSLGTTTNVLRHGPLTYDPVGRMASIDGEVVELSGRELGLLEVLLQRAGRLVSKDQLVEHLCEWGEEVSNNAIEVYVHRLRKKIERGPLRIATVRGLGYCLQKIDSPSA*