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scnpilot_solids1_trim150_scaffold_9420_1

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 2..241

Top 3 Functional Annotations

Value Algorithm Source
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=5079770 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 93
  • Evalue 1.20e-16
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 68.0
  • Bit_score: 91
  • Evalue 1.80e-16
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 93
  • Evalue 1.60e-16

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
TGGTTTGACGGCATGATGCGCGTGGGCCTGACGGCCGGAGCCTCGGCGCCGGAAATCCTGGTGCAGCAGGTGATCGCGCGCATCAAGGAGATCAGCGGTGTCGCGGTGCGCACCATGGAGGGTGTGACCGAAGACATGCGCTTTCCGCTGCCCAAGGGGCTCAAGCTGGACGGCGAGGAGCAGCCCGAGCGCTCGGCGCTGCACGTGCGCGCGCAGGGTGCGGATTCAGTCAAACTCTGA
PROTEIN sequence
Length: 80
WFDGMMRVGLTAGASAPEILVQQVIARIKEISGVAVRTMEGVTEDMRFPLPKGLKLDGEEQPERSALHVRAQGADSVKL*