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scnpilot_solids1_trim150_scaffold_10511_1

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 2..484

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Caldimonas manganoxidans RepID=UPI00037041DC similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 161.0
  • Bit_score: 291
  • Evalue 4.40e-76
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 160.0
  • Bit_score: 291
  • Evalue 1.80e-76
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACS19042.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 160.0
  • Bit_score: 291
  • Evalue 8.10e-76

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
AACGCGCTGGCCGCGGCCGACCTGAAGAAGCGCTACGGCATCGAGGTCTTCACGGGCGGCAACATCCTGCCCGCGATGGCCGCGTACAAGAACTTCCCGGGCATGGAAGGCGCCACCTACTACTACTTCGGCATTCCGAAGAACCCGGTGAACGACGCCCTGGTTTCCATGCACTACAAGGAATTCAAGGCGCCGCCGGACTTCTTCACCGCGGGTGGCTTCTCGGCCGCGATGGCGATCGTGACGGCGCTCAAGAAGACGGGCGGCGACACCAACACCAACAAGCTCATCAAGACCATGGAAGGCATGAGCTTCGAGACGCCCAAGGGCACCATGACCTTCCGCAAGGAAGACCATCAGGCCATGCAGAGCATGTACCACTTCCGCATCAAGGACGATCCGGCGTTTGCCTGGGGCGTGCCCGAGCTCGTGCGCGAGATCAAGCCGCAAGAGATGCAGATTCCGATCCGCAACAAGCGCTGA
PROTEIN sequence
Length: 161
NALAAADLKKRYGIEVFTGGNILPAMAAYKNFPGMEGATYYYFGIPKNPVNDALVSMHYKEFKAPPDFFTAGGFSAAMAIVTALKKTGGDTNTNKLIKTMEGMSFETPKGTMTFRKEDHQAMQSMYHFRIKDDPAFAWGVPELVREIKPQEMQIPIRNKR*