ggKbase home page

scnpilot_solids1_trim150_scaffold_17852_4

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(1072..1905)

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZU6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 283.0
  • Bit_score: 205
  • Evalue 9.40e-50
Porin {ECO:0000313|EMBL:EHL22093.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 283.0
  • Bit_score: 205
  • Evalue 1.30e-49
porin similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 311.0
  • Bit_score: 113
  • Evalue 1.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
CTGCTCAGCGGCTCGACCATGAACAACCTCGTGAGCCGCCTGGGCGTGCGCGGCAGCGAAGACCTGGGCGGCGGGCTGAAGGCCGGGTTCACGTTCGAGACCGGCCTCTCGCTGCACGACGGCTCCACCATGACGAGCGGCAACGGCGGCGGTTTCTGGGGCCGCCAGGCCGATCTGTGGCTGGGCGGCGGCTGGGGCACGCTGCGCCTGGGCCGCGGCTACTCGCCCGCCGACAGCGCCACCTGGACCTGGGACCTCACCGGCCTGTCCAACTACAACGTCGTCGAGAACATGTTCCTAGACGTCGGCACCGACTACCGCAACAGCAGCCAGATCAGCTACAAGACACCGAACGTGAAGGGCTGGAGCGCGCAGATCGCCCACGTGCTCAGGGCCGACCACCACAATCGCAGCGGCACGCCGGATGGCCGCGGCAAGTGGGACCTCAACGTGATCTACGCCCAGGGCCCGATCGGCGTGGCGCTGGACATGAACAGGCTCTCGGGCCAGAGCACCAACTACGCACTGGGCGGCAAATACGACTTCGGTGCCTGGGCGATCGCCGCATCCTTCGTCAACGCCCGCACGCTCGAATATGGCGACGGCAGCTTCGGCCAGCGCCGCGGCTTCACGCTGGGCGCGCAGGTGCGCAGCGGCGCCTTCAGCGCCACACTCGACTTGGGGCGCGACCTGAAGAACAGCGCCGGACGCAAATACACCAACGCACTGCTCGAAGGCCGGTACACGCTTTCCAAGCGCACCATGGCCTACGCCGCCGTGCTGCGCATCGACGGTGGCACCAGCTACGGACTGGGCATGCAGCACCGGTTCTGA
PROTEIN sequence
Length: 278
LLSGSTMNNLVSRLGVRGSEDLGGGLKAGFTFETGLSLHDGSTMTSGNGGGFWGRQADLWLGGGWGTLRLGRGYSPADSATWTWDLTGLSNYNVVENMFLDVGTDYRNSSQISYKTPNVKGWSAQIAHVLRADHHNRSGTPDGRGKWDLNVIYAQGPIGVALDMNRLSGQSTNYALGGKYDFGAWAIAASFVNARTLEYGDGSFGQRRGFTLGAQVRSGAFSATLDLGRDLKNSAGRKYTNALLEGRYTLSKRTMAYAAVLRIDGGTSYGLGMQHRF*