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scnpilot_solids1_trim150_scaffold_24468_3

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(1762..1905)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 47.0
  • Bit_score: 92
  • Evalue 1.70e-16
Transcription termination factor Rho n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MI29_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 47.0
  • Bit_score: 92
  • Evalue 1.20e-16
rho; transcription termination factor rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 47.0
  • Bit_score: 92
  • Evalue 3.70e-17

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
CCCGAGATCCTGCAGAAGACCCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAATCGATGGAGCTCATGATCAAGAAAATGCGCGAGACCAAGAGCAACGTCGATTTCTTCGAAGCCATGCGCCGGGGCGGCTGA
PROTEIN sequence
Length: 48
PEILQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG*