ggKbase home page

scnpilot_solids1_trim150_scaffold_21191_2

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 913..1491

Top 3 Functional Annotations

Value Algorithm Source
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] id=5079919 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 202.0
  • Bit_score: 319
  • Evalue 2.40e-84
Exonuclease RNase T and DNA polymerase III; K13288 oligoribonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 191.0
  • Bit_score: 315
  • Evalue 1.10e-83
  • rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 192.0
  • Bit_score: 323
  • Evalue 1.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Burkholderiales_65_51 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGACTGAATCGACCCCCGACACCCCCGCGCAGCTCGCCAAATCCGATCAGAATCTGGTCTGGCTCGACTGTGAAATGTCCGGCCTGGACCCCGAAAAAGAGCGCCTGATCGAGATCGCCATCATCGTCACCGGCCCGCAACTCACCCCGCGCGTGGAGGGGCCCGTGCTGGTCATCCACCAGGACGATGCCTTGCTCGATGCCATGGACGCCTGGAACAAGGGCACGCACGGCAAGAGCGGGCTGATCGACAAGGTGCGCGCGTCCACACTCAGCGAGGCGCAGGCGGAAGAGGAAATCCTCAAGTTCATCAAGCGCTACGTGCCCAAGAACAGCACGCCGATGTGCGGCAACACCATCGGGCAGGACCGGCGCTTTCTCGTCAAGTACATGCCCAAACTGGAAGCGTATTTCCACTATCGCAACATCGACGTGAGCACGCTCAAGGAACTGGCCAAGCGCTGGAAGCCGCAAGTGGCGGAGTCGTTCAAGAAAGCGCAGAAGCACACGGCCCTGGCCGACGTGCATGAGTCGATCGACGAGCTCGAGCACTACCGCAAGCACTTCCTGAACGTGTGA
PROTEIN sequence
Length: 193
MTESTPDTPAQLAKSDQNLVWLDCEMSGLDPEKERLIEIAIIVTGPQLTPRVEGPVLVIHQDDALLDAMDAWNKGTHGKSGLIDKVRASTLSEAQAEEEILKFIKRYVPKNSTPMCGNTIGQDRRFLVKYMPKLEAYFHYRNIDVSTLKELAKRWKPQVAESFKKAQKHTALADVHESIDELEHYRKHFLNV*