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scnpilot_solids1_trim150_scaffold_31236_2

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(857..1279)

Top 3 Functional Annotations

Value Algorithm Source
Crp/Fnr family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037FD70E similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 132.0
  • Bit_score: 167
  • Evalue 1.10e-38
cAMP-binding protein {ECO:0000313|EMBL:EJL76423.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 132.0
  • Bit_score: 166
  • Evalue 2.60e-38
transcriptional regulator, Crp/Fnr family; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 132.0
  • Bit_score: 165
  • Evalue 1.30e-38

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GATACAGGCGAAGTCTGGTCGCTGAGCTACGACCACCTGTTGAGCGCGAGCGCCCGACAGCCCGATCTGCTCACGGCGCTGCATGCGGCGATGAGCCGCAAAATCAGCCGCGACCACGAATTGATGCTGTCGCTGGCCACCTTGCCCGCTGACGTGCGCGTCGCCGACTTCCTGCGCAACTGGGCGGGTTCACTGGCCGAGCGGGGACTGCGCACCGACAAGATCACTTTGCCGCTCACGCGCGCCGAAGTCGGCAGCTATCTGGGCATGACGCTCGAATCGGTCAGCCGCGCACTCTCGCGTCTGGATGGCGCCGACGTCATCCGCGTGGACAATCGGTTCCGGCGCGACATCGAAATTCCGGAAGTCGCGGCGCTCACCGGATTCATAGAGCGCAATGGATTGGCGGCGGCAGTTCGCTGA
PROTEIN sequence
Length: 141
DTGEVWSLSYDHLLSASARQPDLLTALHAAMSRKISRDHELMLSLATLPADVRVADFLRNWAGSLAERGLRTDKITLPLTRAEVGSYLGMTLESVSRALSRLDGADVIRVDNRFRRDIEIPEVAALTGFIERNGLAAAVR*