ggKbase home page

scnpilot_solids1_trim150_scaffold_41909_1

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 3..383

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator id=12550944 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 125.0
  • Bit_score: 205
  • Evalue 4.30e-50
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 125.0
  • Bit_score: 184
  • Evalue 2.50e-44
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 124.0
  • Bit_score: 205
  • Evalue 6.00e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
CCCGGCACGCTGGAGGAGCTGCGCTCGGCGCCCCTGATCACGTCCAGCGTGGTCGGCAAGCAGTTGCGCCTGAGCGCCTACCGGGGCGAGGAACGCCGGGAGGTCATGCTGGAACCCACGCTGATCTCCGAGCACTTCCCGTTCCTGCGCCAGGGCATCCTCGCCGGCCTGGGCCTGGGGCTGGTGCCCGACTACGTGGTGCAGGACACCATCGCCACGGGCGAGGTGCTCACCACGCTGGACGCCTGGCGCCTGAGCATCTTCGGCACACGCATGTACCTGCTGTACATGCCGGGCCGCTACCAGACGCACGCGGTGCGCACCTGCATCGACTATTTGTTGCAAAAAGCACGCCAGCTGCCGCCACCGGCATCGGCCTGA
PROTEIN sequence
Length: 127
PGTLEELRSAPLITSSVVGKQLRLSAYRGEERREVMLEPTLISEHFPFLRQGILAGLGLGLVPDYVVQDTIATGEVLTTLDAWRLSIFGTRMYLLYMPGRYQTHAVRTCIDYLLQKARQLPPPASA*