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scnpilot_solids1_trim150_scaffold_11

Search features with annotation key words

Displaying items 61-90 of 276 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_11_60
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64209..64862)
DNA (654bp) protein (218aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium yannicii RepID=UPI0002F8BB0C rbh
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KDA05777.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_11_61
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(64865..65635)
DNA (771bp) protein (257aa)
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C09B9 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_11_62
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65740..66534
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K333_9MICO rbh
HTH-type transcriptional regulator KipR {ECO:0000313|EMBL:KJL30761.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_11_63
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66557..67447)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6ADE rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KDA05779.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
alpha/beta hydrolase fold protein
scnpilot_solids1_trim150_scaffold_11_64
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67444..68196)
DNA (753bp) protein (251aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C4645 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KDA05780.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_11_65
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68193..68861)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377CB29 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA05781.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_11_66
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68842..70422)
DNA (1581bp) protein (527aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003821B8C rbh
Acid--CoA ligase {ECO:0000313|EMBL:KDA05782.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_11_67
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70422..71522)
DNA (1101bp) protein (367aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KDA05783.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids1_trim150_scaffold_11_68
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71525..72400)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E7E7 rbh
ABC transporter permease {ECO:0000313|EMBL:KDA05784.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids1_trim150_scaffold_11_69
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72397..73107)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037414F8 rbh
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KDA05785.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter related protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_11_70
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73104..73880)
DNA (777bp) protein (259aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E468_9MICO rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA05786.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
livG; branched-chain amino acid transport ATP-binding protein LivG
scnpilot_solids1_trim150_scaffold_11_71
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73888..75081)
DNA (1194bp) protein (398aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371DA05 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35400.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC branched-chain amino acid transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_11_72
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75221..75661
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDK5_9MICO
Transcriptional activatory protein BadR {ECO:0000313|EMBL:KJL28154.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_11_73
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75658..76884
DNA (1227bp) protein (409aa)
MFS transporter n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFJ4_9MICO rbh
Multidrug efflux protein YfmO {ECO:0000313|EMBL:KJL28155.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily rbh
scnpilot_solids1_trim150_scaffold_11_74
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76911..77393
DNA (483bp) protein (161aa)
Proline--tRNA ligase {ECO:0000313|EMBL:KJL35900.1}; EC=6.1.1.15 {ECO:0000313|EMBL:KJL35900.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHN6_9MICO
prolyl-tRNA synthetase
scnpilot_solids1_trim150_scaffold_11_75
unknown

Not on your lists

comp(77397..77885)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B72F0D
scnpilot_solids1_trim150_scaffold_11_76
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77957..79048
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EON23284.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_11_trna_2
unknown

Not on your lists

comp(79120..79192)
DNA (73bp)
transferRNA Lys
scnpilot_solids1_trim150_scaffold_11_77
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79368..80177
DNA (810bp) protein (270aa)
Histidinol-phosphatase {ECO:0000313|EMBL:KJL17904.1}; EC=3.1.3.15 {ECO:0000313|EMBL:KJL17904.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
archaeal fructose-1,6-bisphosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EBC8D7 rbh
scnpilot_solids1_trim150_scaffold_11_78
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80209..80781
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034500AD
Uncharacterized protein {ECO:0000313|EMBL:KJL17905.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
scnpilot_solids1_trim150_scaffold_11_79
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80830..81069)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003186763
Uncharacterized protein {ECO:0000313|EMBL:KJL28838.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_11_80
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81151..81768
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372882B
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL27044.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_11_81
unknown

Not on your lists

81833..82018
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_11_82
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82590..83249
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KUF8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL28167.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
neuraminidase; K09807 hypothetical protein
scnpilot_solids1_trim150_scaffold_11_83
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83283..84791)
DNA (1509bp) protein (503aa)
ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034819C8 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hflX; GTPase; K03665 GTP-binding protein HflX rbh
scnpilot_solids1_trim150_scaffold_11_84
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84864..85508
DNA (645bp) protein (215aa)
16S RNA G1207 methylase RsmC n=1 Tax=Microbacterium sp. TS-1 RepID=U2X7V6_9MICO rbh
16S rRNA methyltransferase {ECO:0000313|EMBL:KDA05795.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
16S RNA G1207 methylase RsmC rbh
scnpilot_solids1_trim150_scaffold_11_85
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(85530..86402)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C4383 rbh
diaminopimelate epimerase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_11_86
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86413..86958)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D6037
Uncharacterized protein {ECO:0000313|EMBL:KJQ53057.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
bifunctional deaminase-reductase-like protein
scnpilot_solids1_trim150_scaffold_11_87
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86984..87898)
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378175C rbh
scnpilot_solids1_trim150_scaffold_11_88
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87945..89492)
DNA (1548bp) protein (516aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035D1395 rbh
2-methylthioadenine synthetase rbh
Displaying items 61-90 of 276 in total

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