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scnpilot_solids1_trim150_scaffold_32

Search features with annotation key words

Displaying items 61-90 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_32_61
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

64092..66302
DNA (2211bp) protein (737aa)
DNA gyrase subunit B {ECO:0000313|EMBL:KJL18774.1}; EC=5.99.1.3 {ECO:0000313|EMBL:KJL18774.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA topoisomerase IV subunit B n=1 Tax=Microbacterium barkeri RepID=UPI0002ECA41C rbh
scnpilot_solids1_trim150_scaffold_32_62
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66364..68802)
DNA (2439bp) protein (813aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA topoisomerase IV subunit A n=1 Tax=Microbacterium barkeri RepID=UPI00030A0942 rbh
scnpilot_solids1_trim150_scaffold_32_63
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68895..70013
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000310315B rbh
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91950.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_32_64
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70032..71069)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D704A4 rbh
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91951.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_32_65
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71275..71568
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K404_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL19633.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_32_66
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71632..72126)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEI1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ54691.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_32_67
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72169..72579
DNA (411bp) protein (137aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
dut; dUTPase; K01520 dUTP pyrophosphatase [EC:3.6.1.23]
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Microbacterium RepID=UPI000378D118
scnpilot_solids1_trim150_scaffold_32_68
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72576..73169
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGJ9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM74589.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_32_69
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73166..73948
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AA320 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27836.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_32_70
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74123..76957
DNA (2835bp) protein (945aa)
Aconitate hydratase {ECO:0000313|EMBL:KJL17589.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KJL17589.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
acnA; aconitase A; K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
aconitate hydratase n=1 Tax=Microbacterium barkeri RepID=UPI000300BF8A rbh
scnpilot_solids1_trim150_scaffold_32_71
unknown

Not on your lists

77086..77391
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_32_72
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77506..79449
DNA (1944bp) protein (648aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
dxs; deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Microbacterium barkeri RepID=UPI00031E9B0A rbh
scnpilot_solids1_trim150_scaffold_32_73
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79502..80173)
DNA (672bp) protein (224aa)
TetR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B5F9E1
HTH-type transcriptional regulator TtgR {ECO:0000313|EMBL:KJL18796.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_32_74
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80216..81664)
DNA (1449bp) protein (483aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F2861D rbh
scnpilot_solids1_trim150_scaffold_32_75
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81661..82245)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344F4CC
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91960.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_32_76
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82266..83891
DNA (1626bp) protein (542aa)
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:KJL18799.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL18799.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DA00FF rbh
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_32_77
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

83884..84783
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FF00D7 rbh
hypothetical protein; K07029
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_32_78
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84789..86411
DNA (1623bp) protein (541aa)
Cholesterol oxidase {ECO:0000313|EMBL:KJL31658.1}; EC=1.1.3.6 {ECO:0000313|EMBL:KJL31658.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03333 cholesterol oxidase [EC:1.1.3.6] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003472D23 rbh
scnpilot_solids1_trim150_scaffold_32_79
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86474..88618)
DNA (2145bp) protein (715aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002E681C1 rbh
Fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:KJL18802.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fadB; 3-hydroxyacyl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_32_80
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88627..89832)
DNA (1206bp) protein (402aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:KJQ54704.1}; EC=2.3.1.16 {ECO:0000313|EMBL:KJQ54704.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
atoB; acetyl-CoA acetyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] rbh
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002EC468A rbh
scnpilot_solids1_trim150_scaffold_32_81
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89906..91102)
DNA (1197bp) protein (399aa)
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3Z4_9MICO rbh
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91964.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_32_82
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91095..91676)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F99C7E rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27850.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_32_83
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91702..92859
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030AB4FC rbh
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL19615.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hydrolase of the alpha/beta superfamily rbh
scnpilot_solids1_trim150_scaffold_32_84
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92866..93297)
DNA (432bp) protein (144aa)
cysteine desufuration protein SufE n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EB52B
Cysteine desufuration protein SufE {ECO:0000313|EMBL:EYT59134.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SufE protein probably; K02426 cysteine desulfuration protein SufE
scnpilot_solids1_trim150_scaffold_32_85
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(93316..94212)
DNA (897bp) protein (299aa)
thtR; rhodanese-related sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
Thiosulfate sulfurtransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDK6_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_32_86
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94325..95407
DNA (1083bp) protein (361aa)
ATPase n=1 Tax=Microbacterium barkeri RepID=UPI00030790D4 rbh
ATPase {ECO:0000313|EMBL:KDA05611.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ATPase; K06916 rbh
scnpilot_solids1_trim150_scaffold_32_87
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95426..96043)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003759873
Polyisoprenoid-binding protein {ECO:0000313|EMBL:EWT02604.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_32_88
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96237..97472
DNA (1236bp) protein (412aa)
ammonia channel protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F73FBB rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ammonia permease; K03320 ammonium transporter, Amt family rbh
scnpilot_solids1_trim150_scaffold_32_89
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97492..98070
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4A07A
Uncharacterized protein {ECO:0000313|EMBL:KDA05613.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
PemK domain-containing protein
scnpilot_solids1_trim150_scaffold_32_90
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98165..98551
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348C930
SPW repeat protein {ECO:0000313|EMBL:KJL17603.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
Displaying items 61-90 of 178 in total

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