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scnpilot_solids1_trim150_scaffold_71

Search features with annotation key words

Displaying items 61-90 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_71_61
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(61557..61898)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C1586
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_71_62
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62029..62301)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A8317
Uncharacterized protein {ECO:0000313|EMBL:KJL27764.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_71_63
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62298..62702)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRK9_9MICO
Flagellar protein FliS {ECO:0000313|EMBL:KJL22514.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
flagellar protein FliS; K02422 flagellar protein FliS
scnpilot_solids1_trim150_scaffold_71_64
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(62702..64069)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C7AF4 rbh
flagellar hook-associated 2 domain-containing protein; K02407 flagellar hook-associated protein 2 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_71_65
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64153..65040)
DNA (888bp) protein (296aa)
Flagellin domain-containing protein n=1 Tax=Microbacterium sp. TS-1 PF3_9MICO">RepID=U2XPF3_9MICO rbh
Flagellin domain-containing protein {ECO:0000313|EMBL:GAD34767.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
flagellin domain-containing protein; K02406 flagellin rbh
scnpilot_solids1_trim150_scaffold_71_66
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(65150..65953)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C2F92 rbh
RNA polymerase sigma factor FliA {ECO:0000313|EMBL:KJL22517.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA
scnpilot_solids1_trim150_scaffold_71_67
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

66247..66735
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372EE94
FlgN family protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_71_68
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66749..68158
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRK3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM82412.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK rbh
scnpilot_solids1_trim150_scaffold_71_69
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68168..69049
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348943E rbh
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:EYT58251.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
flagellar hook-associated protein 3; K02397 flagellar hook-associated protein 3 FlgL
scnpilot_solids1_trim150_scaffold_71_70
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69046..69417
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C3D0D
Flagellar assembly factor FliW {ECO:0000313|EMBL:KJL22521.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K13626 flagellar assembly factor FliW
scnpilot_solids1_trim150_scaffold_71_71
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69466..70062
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB65D1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB {ECO:0000313|EMBL:KJQ55055.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
inactive homolog of metal-dependent protease, molecular chaperone
scnpilot_solids1_trim150_scaffold_71_72
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70059..70520
DNA (462bp) protein (154aa)
acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E11214
Uncharacterized protein {ECO:0000313|EMBL:KDA05269.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_71_73
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


70517..71584
DNA (1068bp) protein (356aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococ
metal-dependent protease with possible chaperone activity; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
O-sialoglycoprotein endopeptidase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034561E1 rbh
scnpilot_solids1_trim150_scaffold_71_74
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71581..72018
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348D028
Uncharacterized protein {ECO:0000313|EMBL:EYT58256.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_71_75
unknown

Not on your lists

72295..73095
DNA (801bp) protein (267aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_71_76
unknown

Not on your lists

73092..74168
DNA (1077bp) protein (359aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_71_77
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74176..75429)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003720163
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92713.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SAM-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_71_78
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75806..76102
DNA (297bp) protein (99aa)
10 kDa chaperonin n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDV0_MICTS
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
groES; co-chaperonin GroES (HSP10); K04078 chaperonin GroES
scnpilot_solids1_trim150_scaffold_71_79
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76179..77102
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTR2_9MICO rbh
EamA-like transporter family protein {ECO:0000313|EMBL:KJQ55047.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
permease; K05786 chloramphenicol-sensitive protein RarD rbh
scnpilot_solids1_trim150_scaffold_71_80
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77225..78511
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034849D6 rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT58260.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
livK; putative branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_71_81
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78652..79455)
DNA (804bp) protein (268aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B42D3 rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJL22532.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
livF; branched-chain amino acid ABC transporter,ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_71_82
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79452..80462)
DNA (1011bp) protein (337aa)
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJL23637.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL23637.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EAED2D rbh
livG; putative branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_71_83
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80452..81429)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A0231 rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KDA06409.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
amino acid ABC transporter; K01998 branched-chain amino acid transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_71_84
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81431..82780)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003059996 rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJL29335.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
inner-membrane translocator rbh
scnpilot_solids1_trim150_scaffold_71_85
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83055..84560
DNA (1506bp) protein (502aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
inosine-5`-monophosphate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002E4190C rbh
scnpilot_solids1_trim150_scaffold_71_86
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84784..86154
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00037AFC86 rbh
Leucobacter komagatae strain VKM ST2845 L_komagatae_03, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53332.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
major facilitator superfamily protein rbh
scnpilot_solids1_trim150_scaffold_71_87
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86151..87602
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00036391DD rbh
Leucobacter komagatae strain VKM ST2845 L_komagatae_03, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53438.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
lyase rbh
scnpilot_solids1_trim150_scaffold_71_88
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87741..88595)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000377B0DF
DNA/RNA helicase {ECO:0000313|EMBL:KHK96197.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
superfamily I DNA and RNA helicase and helicase subunits
scnpilot_solids1_trim150_scaffold_71_89
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88909..90027
DNA (1119bp) protein (373aa)
Inosine 5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EQM82381.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EQM82381.1};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine 5'-monophosphate dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTN9_9MICO rbh
scnpilot_solids1_trim150_scaffold_71_90
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90024..90866
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003451740 rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92729.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
Displaying items 61-90 of 109 in total

View Taxonomy