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scnpilot_solids1_trim150_scaffold_83

Search features with annotation key words

Displaying items 151-180 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_83_150
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149610..151025)
DNA (1416bp) protein (472aa)
MFS transporter n=1 Tax=Humibacter albus RepID=UPI0003B30782 rbh
MFS transporter {ECO:0000313|EMBL:KHL00087.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative transporter rbh
scnpilot_solids1_trim150_scaffold_83_151
unknown

Not on your lists

151073..151168
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_83_152
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

151165..152607
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347498A rbh
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase {ECO:0000313|EMBL:KJL29435.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_83_153
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152604..153284
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EC25B7 rbh
HTH-type transcriptional regulator McbR {ECO:0000313|EMBL:KJQ56061.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_83_154
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

153284..154798
DNA (1515bp) protein (505aa)
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:KJL33186.1}; EC=1.2.1.85 {ECO:0000313|EMBL:KJL33186.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NAD-dependent aldehyde dehydrogenase; K00151 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] rbh
betaine-aldehyde dehydrogenase n=1 Tax=Agromyces italicus RepID=UPI0003B40816 rbh
scnpilot_solids1_trim150_scaffold_83_155
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154832..155995
DNA (1164bp) protein (388aa)
bphC; manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase BphC (EC:1.13.11.39) rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B074C rbh
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:EYT58339.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_83_156
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155992..156780
DNA (789bp) protein (263aa)
2-hydroxyhexa-2,4-dienoate hydratase {ECO:0000313|EMBL:KJL26268.1}; EC=4.2.1.132 {ECO:0000313|EMBL:KJL26268.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
2-keto-4-pentenoate hydratase; K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] rbh
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB56C rbh
scnpilot_solids1_trim150_scaffold_83_157
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156765..157568
DNA (804bp) protein (268aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] rbh
alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034827B1 rbh
Alpha-dehydro-beta-deoxy-D-glucarate aldolase {ECO:0000313|EMBL:EYT58337.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_83_158
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157732..158955
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307352F rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM82320.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
major facilitator superfamily protein rbh
scnpilot_solids1_trim150_scaffold_83_159
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158983..160347)
DNA (1365bp) protein (455aa)
serine--pyruvate aminotransferase n=1 Tax=Brevibacterium linens RepID=UPI000050F93C rbh
Short chain fatty acid transporter {ECO:0000313|EMBL:KHS53094.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
short chain fatty acid transporter; K02106 short-chain fatty acids transporter rbh
scnpilot_solids1_trim150_scaffold_83_160
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160444..161172
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030030FB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29429.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_83_161
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(161275..162156)
DNA (882bp) protein (294aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
Bifunctional protein FolD n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFE3_9MICO rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids1_trim150_scaffold_83_162
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162153..163427)
DNA (1275bp) protein (425aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glyA; glycine/serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
serine hydroxymethyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034764D9 rbh
scnpilot_solids1_trim150_scaffold_83_163
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163631..164806
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] rbh
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVF7_9MICO rbh
scnpilot_solids1_trim150_scaffold_83_164
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

165252..167378
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034915BC rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KDA06446.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hemagglutinin/hemolysin-like protein rbh
scnpilot_solids1_trim150_scaffold_83_165
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

167414..167785
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031DB827
Uncharacterized protein {ECO:0000313|EMBL:KJL22603.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
4-amino-4-deoxy-L-arabinose transferase
scnpilot_solids1_trim150_scaffold_83_166
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

167782..169143
DNA (1362bp) protein (454aa)
FAD/FMN-containing dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15]
FAD-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BFFA3 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_83_167
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169136..169531
DNA (396bp) protein (132aa)
CTP pyrophosphohydrolase {ECO:0000313|EMBL:KJL24381.1}; EC=3.6.1.65 {ECO:0000313|EMBL:KJL24381.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQM6_9MICO
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_solids1_trim150_scaffold_83_168
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169547..170326)
DNA (780bp) protein (260aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVG3_9MICO rbh
N-acetylglucosamine-6-phosphate isomerase rbh
scnpilot_solids1_trim150_scaffold_83_169
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(170319..171266)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E5670B rbh
ROK family protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_83_170
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(171263..172429)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A1D95 rbh
ROK family protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_83_171
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

172607..174055
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E6C7FB rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_83_172
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174283..176502)
DNA (2220bp) protein (740aa)
Isocitrate dehydrogenase [NADP] {ECO:0000313|EMBL:KJL22593.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KJL22593.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
monomeric isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
isocitrate dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ACA15 rbh
scnpilot_solids1_trim150_scaffold_83_173
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

176651..177109
DNA (459bp) protein (153aa)
speG; histone acetyltransferase HPA2; K00657 diamine N-acetyltransferase [EC:2.3.1.57]
Acetyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFF5_9MICO
Acetyltransferase {ECO:0000313|EMBL:KDA06439.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_83_174
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

177313..178326
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E15385 rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92774.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_83_175
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

178455..179762
DNA (1308bp) protein (436aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI000303F86C rbh
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL24392.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
sugar ABC transporter periplasmic protein rbh
scnpilot_solids1_trim150_scaffold_83_176
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179838..180845
DNA (1008bp) protein (336aa)
ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI0003651887 rbh
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJQ54988.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_83_177
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

180842..181738
DNA (897bp) protein (299aa)
ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI000364AFDD rbh
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJL24394.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_83_178
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

181738..183969
DNA (2232bp) protein (744aa)
Alpha-xylosidase {ECO:0000313|EMBL:KJQ54990.1}; EC=3.2.1.177 {ECO:0000313|EMBL:KJQ54990.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
alpha-glucosidase, family 31 of glycosyl hydrolase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
alpha-glucosidase n=1 Tax=Microbacterium barkeri RepID=UPI0002DE3692 rbh
scnpilot_solids1_trim150_scaffold_83_179
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

183966..185396
DNA (1431bp) protein (477aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
bglJ; beta-glycosidase (EC:3.2.1.-) rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030416A0 rbh
Displaying items 151-180 of 198 in total

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